Escherichia coli SQ37 |
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Putative Escherichia coli SQ37 RM systems
Ref: Quan,S. et al. unpublished
REBASE ref # 19614
Complete sequence: 4,633,461 bp
GenBank #: CP011320
REBASE acronym: EcoSQ37
Org_num: 15459
All begin SG48_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4426 | toxic peptide regulated by antisense sRNA symR | |||
| 4428 | S | S.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | S.EcoSQ37ORF4429P |
| 4429 | M | M.SenHNK130ORF17125P (100% identity) | AACNNNNNNGTGC | M.EcoSQ37ORF4429P |
| ??? | R | Msa17ORFC2P (100% identity) | AACNNNNNNGTGC | EcoSQ37ORF4429P |
| ??? | Mrr restriction system protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2002 | amino acid exporter for phenylalanine, | |||
| 2003 | V | V.SflFF64DcmP (100% identity) | CCWGG | V.EcoSQ37DcmP |
| 2004 | M | M.SflLIN6DcmP (100% identity) | CCWGG | M.EcoSQ37DcmP |
| 2005 | HD superfamily phosphohydrolase | |||
| 3318 | global DNA-binding transcriptional dual | |||
| 3319 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.EcoSQ37ORF3319P |
| 3320 | membrane protein | |||
| 3443 | D-ribulose-5-phosphate 3-epimerase | |||
| 3444 | M | M.UbaC1152DamP (100% identity) | GATC | M.EcoSQ37DamP |
| 3445 | cell division protein that binds to the septal | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1171 | e14 prophage, site-specific DNA recombinase | |||
| 1172 | R | SsoSE61ORF22640P (100% identity) | YCGR | EcoSQ37ORF1172P |
| 1173 | isocitrate dehydrogenase | |||
| 4423 | pseudogene | |||
| 4424 | R | SenHNK130McrCP (100% identity) | EcoSQ37McrCP | |
| 4425 | R | SenHNK130McrBP (100% identity) | EcoSQ37McrBP | |
| 4426 | toxic peptide regulated by antisense sRNA symR | |||
| ??? | type I restriction enzyme EcoKI R protein | |||
| ??? | R | EcoZK126MrrP (100% identity) | EcoSQ37Mrr2P | |
| 4431 | methylated adenine and cytosine restriction | |||
| ??? | Mrr restriction system protein | |||
| 4431 | R | SenHNK130MrrP (100% identity) | EcoSQ37MrrP | |
| 4432 | metal-binding GTPase | |||