Escherichia coli O104:H4 C227-11 |
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Putative Escherichia coli O104:H4 C227-11 RM systems
Ref: Beaulaurier,J.A. et al. unpublished
REBASE ref # 19912
| Sequence length: | GenBank #: | |
| Chromosome: | 5,292,862 bp | CP011331 |
| plasmid unnamed: | 7,893 bp | CP011335 |
REBASE acronym: Eco227
Org_num: 7659
All begin AAF13_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19260 | 550 aa hypothetical protein | |||
| 19265 | R | SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | Eco227ORFGP |
| 19270 | M | M.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | M.Eco227ORFGP |
| 19275 | S | S.SspS13ORF3945P (100% identity) | RTCANNNNNNNNGTGG | S.Eco227ORFGP |
| 19280 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 6705 | hydrolase | |||
| 6710 | M | M.SsoSE61DcmP (100% identity) | CCWGG | M.Eco227DcmP |
| 6715 | V | V.SsoSE61DcmP (100% identity) | V.Eco227DcmP | |
| 6720 | multidrug DMT transporter | |||
| 7280 | 162 aa hypothetical protein | |||
| 7285 | M | M.Sso90ORF15820P (100% identity) | GATC | M.Eco227ORFCP |
| 7290 | LexA family transcriptional regulator | |||
| 7325 | phage protein | |||
| 7330 | M | M.EcoOS402ORF3850P (100% identity) | A | M.Eco227ORFBP |
| 7350 | 5-nucleotidase | |||
| 11300 | 108 aa hypothetical protein | |||
| 11320 | M | M.SsoL4094ORF17545P (100% identity) | A | M.Eco227ORFAP |
| 11325 | TrmB family transcriptional regulator | |||
| 13380 | repressor | |||
| 13385 | M | M.Sso1099I (100% identity) | CTGCAG | M.Eco227ORFHP |
| 13390 | R | Sso1099IP (100% identity) | CTGCAG | Eco227ORFHP |
| 13395 | 215 aa hypothetical protein | |||
| 13475 | regulator | |||
| 13480 | M | M.Esp10290ORF1290P (100% identity) | GATC | M.Eco227ORFIP |
| 13485 | 70 aa hypothetical protein | |||
| 25240 | cell division protein DamX | |||
| 25245 | M | DNA adenine methylase | GATC | M.Eco227DamP |
| 25250 | ribulose-phosphate 3-epimerase | |||
| 25810 | 59 aa hypothetical protein | |||
| 25815 | M | M.EcotcmA3ORF12410P (100% identity) | ATGCAT | M.Eco227ORFFP |
| 25820 | Fis family transcriptional regulator | |||
| plasmid unnamed | ||||
| 27320 | 73 aa hypothetical protein | |||
| 27325 | M | M.Sso3794ORF26595P (100% identity) | SAY | M.Eco227ORFJP |
| 27330 | 103 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1210 | 97 aa hypothetical protein | |||
| 1215 | R | Kpn0718ORF815P (100% identity) | ACCACC | Eco227ORF4204P |
| 1220 | M | M.Kpn0718ORF815P (100% identity) | ACCACC | M.Eco227ORF4204P |
| 1225 | peptidase S8 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 19280 | endoribonuclease SymE | |||
| ??? | R | EcoM1887GmrSDP (65% identity) | Eco227GmrDP | |
| 19290 | 238 aa hypothetical protein | |||