Pseudomonas aeruginosa Carb01 63 |
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Putative Pseudomonas aeruginosa Carb01 63 RM systems
Ref: Kraak,W. and van der Zee,A. unpublished
REBASE ref # 19479
Complete sequence: 7,497,593 bp
GenBank #: CP011317
REBASE acronym: Pae63
Org_num: 15420
All begin YQ19_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1455 | 94 aa hypothetical protein | |||
| 1460 | M | M.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | M.Pae63III |
| 1465 | S | S.PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | S.Pae63III |
| 1470 | transcriptional regulator | |||
| 1475 | R | PaesAG1ORF291P (100% identity) | ATGNNNNNNCCTC | Pae63IIIP |
| 1480 | ArsR family transcriptional regulator | |||
| 14420 | 70 aa hypothetical protein | |||
| 14425 | M | M.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | M.Pae63II |
| ??? | S | S.PaesAG1ORF2671P (100% identity) | CCCANNNNNNTCG | S.Pae63II |
| 14430 | laminin | |||
| 14435 | membrane protein | |||
| 14440 | 547 aa hypothetical protein | |||
| 14445 | helicase | |||
| 14450 | 327 aa hypothetical protein, partial | |||
| 14455 | integrase | |||
| 14460 | ATPase AAA | |||
| 14465 | restriction endonuclease | |||
| 14470 | R | PaesAG1ORF2679P (100% identity) | CCCANNNNNNTCG | Pae63IIP |
| 14475 | transposase | |||
| 33685 | nuclease | |||
| 33690 | S | S.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | S.Pae63IV |
| 33695 | M | M.PaesAG1ORF6375P (100% identity) | CACNNNNNNNRTGT | M.Pae63IV |
| ??? | R | PaePAL01ORF31785P (99% identity) | CACNNNNNNNRTGT | Pae63IVP |
| 33710 | peptidase M15 | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 12300 | ABC transporter substrate-binding protein | |||
| 12305 | M | M.PaesPA3ORF29655P (100% identity) | M.Pae63ORF12305P | |
| 12310 | 96 aa hypothetical protein | |||
| 14370 | transposase | |||
| 14375 | M | M.PaesAG1ORF2662P (100% identity) | M.Pae63ORF14375P | |
| 14380 | 379 aa hypothetical protein | |||
| 28490 | nucleoid-associated protein | |||
| 28495 | M | M.PaesAG1ORF5438P (100% identity) | M.Pae63ORF28495P | |
| 28500 | DNA-binding protein | |||
| 28960 | nucleoid-associated protein | |||
| 28965 | M | M.PaesAG1ORF5438P (100% identity) | M.Pae63ORF28965P | |
| 28970 | DNA-binding protein | |||
| 29260 | protein-disulfide isomerase | |||
| ??? | M | M.PaeZY36ORF27030P (100% identity) | M.Pae63ORFAP | |
| 29265 | 121 aa hypothetical protein | |||
| 30185 | 82 aa hypothetical protein | |||
| 30190 | R | PmeTTORFEP (100% identity) | CTCGAG | Pae63IP |
| ??? | M | M.PmeTTORFEP (100% identity) | CTCGAG | M.Pae63I |
| 30200 | recombinase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 26570 | ATP-dependent OLD family endonuclease | |||
| 26575 | R | PspP16ORFGP (100% identity) | Pae63ORF26580P | |
| ??? | M | M.PspP16ORFGP (100% identity) | M.Pae63ORF26580P | |
| 26585 | 707 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 14445 | helicase | |||
| 14450 | R | Pae2982McrBP (100% identity) | Pae63McrBP | |
| 14455 | integrase | |||
| 14460 | ATPase AAA | |||
| 14465 | R | Pae2982McrCP (100% identity) | Pae63McrCP | |
| 14470 | DEAD/DEAH box helicase | |||