Xanthomonas campestris 17 |
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Putative Xanthomonas campestris 17 RM systems
Ref: Bao,W. et al. unpublished
REBASE ref # 19471
Complete sequence: 5,254,865 bp
GenBank #: CP011256
REBASE acronym: Xca17
Org_num: 15410
All begin XB05_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 525 | pseudogene | |||
| 530 | R | Xeu3836ORF5910P (98% identity) | Xca17ORF545P | |
| 535 | 211 aa hypothetical protein | |||
| 540 | 240 aa hypothetical protein | |||
| 545 | M | M.Xam44ORF560P (97% identity) | M.Xca17ORF545P | |
| 550 | S | S.PspDV1ORF8075P (66% identity) | S.Xca17ORF545P | |
| 555 | 76 aa hypothetical protein | |||
| 10090 | 195 aa hypothetical protein | |||
| 10095 | M | M.Xar6600ORF14090P (100% identity) | M.Xca17ORF10095P | |
| 10100 | damage-inducible protein D | |||
| 10105 | DNA-binding protein | |||
| 10110 | S | S.Xca793ORF6040P (95% identity) | S.Xca17ORF10095P | |
| 10115 | R | Xca33086ORF8570P (99% identity) | Xca17ORF10095P | |
| 10120 | metal-dependent hydrolase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 90 | 73 aa hypothetical protein | |||
| 95 | M | M.XcaCN07aORFAP (100% identity) | M.Xca17ORF95P | |
| 100 | 198 aa hypothetical protein | |||
| 4105 | 111 aa hypothetical protein | |||
| ??? | M | M.Xar3004ORFDP (84% identity) | M.Xca17ORF4110P | |
| 4115 | 81 aa hypothetical protein | |||
| 8395 | 183 aa hypothetical protein | |||
| 8400 | M | M.XciK2ORF17400P (91% identity) | M.Xca17ORF8400P | |
| 8410 | Presumed portal vertex protein | |||
| 13705 | membrane protein | |||
| 13710 | M | M.XciK2ORF17400P (93% identity) | M.Xca17ORF13710P | |
| 13715 | Presumed portal vertex protein | |||
| 14635 | 309 aa hypothetical protein | |||
| 14640 | M | M.RspIH1DndAP (50% identity) | M.Xca17DndAP | |
| 14645 | DNA sulfur modification protein DndB | |||
| 14640 | cysteine desulfurase | |||
| 14645 | M | M.Ami6DndBP (58% identity) | M.Xca17DndBP | |
| 14650 | DNA phosphorothioation system sulfurtransferase DndC | |||
| 14645 | DNA sulfur modification protein DndB | |||
| 14650 | M | M.Ami6DndCP (64% identity) | M.Xca17DndCP | |
| 14655 | 652 aa hypothetical protein | |||
| 14650 | DNA phosphorothioation system sulfurtransferase DndC | |||
| 14655 | M | M.SavMC3DndDP (21% identity) | M.Xca17DndDP | |
| 14660 | 127 aa hypothetical protein | |||
| 14655 | 652 aa hypothetical protein | |||
| 14660 | M | M.RspIH1DndEP (44% identity) | M.Xca17DndEP | |
| 14665 | transposase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6225 | pseudogene | |||
| 6230 | R | DspDHT3ORF12600P (98% identity) | Xca17ORF6235P | |
| 6235 | M | M.BspBGKORF3235P (80% identity) | M.Xca17ORF6235P | |
| 6240 | 666 aa hypothetical protein | |||