Flavobacterium psychrophilum VQ50 |
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Putative Flavobacterium psychrophilum VQ50 RM systems
Ref: Castillo,D. Sr. et al. unpublished
REBASE ref # 19430
Complete sequence: 2,806,870 bp
GenBank #: CP010277
REBASE acronym: FpsVQ50
Org_num: 15365
All begin IY39_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 130 | succinyl-CoA:3-ketoacid-CoA transferase | |||
| 135 | RM | FpsV433ORF65P (100% identity) | FpsVQ50ORF135P | |
| 140 | 206 aa hypothetical protein | |||
| 1230 | damage-inducible protein D | |||
| 1235 | RM | FpsV433ORF1145P (100% identity) | FpsVQ50ORF1235P | |
| 1240 | D-tyrosyl-tRNA(Tyr) deacylase | |||
| 3745 | RNA methyltransferase | |||
| 3750 | C | C.FpsV433ORF3640P (100% identity) | C.FpsVQ50ORF3755P | |
| 3755 | M | M.FpsV433ORF3640P (100% identity) | GATC | M.FpsVQ50ORF3755P |
| 3760 | 208 aa hypothetical protein | |||
| 4070 | histidine kinase | |||
| 4075 | C | C.FpsV433ORF3955P (100% identity) | C.FpsVQ50ORF4080P | |
| 4080 | M | M.FpsV433ORF3955P (100% identity) | CGCG | M.FpsVQ50ORF4080P |
| 4085 | R | FpsV433ORF3955P (100% identity) | CGCG | FpsVQ50ORF4080P |
| 4090 | selenocysteine lyase | |||
| 7625 | 146 aa hypothetical protein | |||
| 7630 | M | M.FpsV433ORF7490P (100% identity) | CTGAAG | M.FpsVQ50ORF7630P |
| 7635 | RM | FpsV433ORF7490P (100% identity) | CTGAAG | FpsVQ50ORF7630P |
| 7640 | C | C.FpsV433ORF7490P (100% identity) | C.FpsVQ50ORF7630P | |
| 7645 | 214 aa hypothetical protein | |||
| 10505 | 75 aa hypothetical protein | |||
| ??? | R | FpsV433ORF10530P (100% identity) | CCNGG | FpsVQ50ORF10495P |
| 10515 | M | M.FpsV433ORF10530P (91% identity) | CCNGG | M.FpsVQ50ORF10495P |
| 10520 | 241 aa hypothetical protein | |||
| 11240 | multidrug ABC transporter ATPase | |||
| 11245 | R | FpsV433ORF11210P (100% identity) | CCGG | FpsVQ50ORF11250P |
| 11250 | M | M.FpsV433ORF11210P (100% identity) | CCGG | M.FpsVQ50ORF11250P |
| 11255 | peptidase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 10635 | 980 aa hypothetical protein | |||
| 10640 | R | FpsV433ORF10645P (100% identity) | CGCAG | FpsVQ50ORF10650P |
| 10645 | toxin Fic | |||
| 10650 | M | M.FpsV433ORF10645P (100% identity) | CGCAG | M.FpsVQ50ORF10650P |
| 10655 | 63 aa hypothetical protein | |||