Scytonema millei VB511283 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Scytonema millei VB511283 RM systems
Ref: Sen,D. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19343
Contig set: 11,275,391 bp
GenBank #: JTJC00000000 (NZ_JTJC00000000)
REBASE acronym: Smi511283
Org_num: 15261
All begin QH73_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3475 | M | M.Cfl70606ORF2988P (36% identity) | CTCGAG | M.Smi511283ORF3475P |
| 3480 | 209 aa hypothetical protein | |||
| 49365 | 105 aa hypothetical protein | |||
| ??? | M | site-specific DNA methylase | M.Smi511283ORFAP | |
| 49370 | 198 aa hypothetical protein | |||
| 49305 | 121 aa hypothetical protein | |||
| 49310 | RM | NpuORF91P (67% identity) | Smi511283ORF49310P | |
| 49315 | helicase | |||
| 1620 | pseudogene | |||
| ??? | M | M.Cth7203ORF3809P (76% identity) | M.Smi511283ORF1625P | |
| 1635 | 216 aa hypothetical protein | |||
| 1640 | twitching motility protein PilT | |||
| 1645 | 78 aa hypothetical protein | |||
| 1650 | R | CspNUC1ORF19075P (45% identity) | Smi511283ORF1625P | |
| 1655 | 65 aa hypothetical protein | |||
| 45190 | multicopper oxidase type 3 | |||
| 45195 | M | M.Smi511283ORF28565P (69% identity) | GTCGAC | M.Smi511283ORF45195P |
| 45200 | R | Cth7203ORF5642P (94% identity) | GTCGAC | Smi511283ORF45195P |
| 45205 | cation transporter | |||
| 2560 | pseudogene | |||
| 2565 | M | 335 aa hypothetical protein | M.Smi511283ORF2565P | |
| 2570 | 350 aa hypothetical protein | |||
| 9615 | (2Fe-2S)-binding protein | |||
| 9620 | RM | SspAAP62ORFGP (84% identity) | Smi511283ORF9630P | |
| 9625 | M | M.CovORFDP (83% identity) | M2.Smi511283ORF9630P | |
| 9630 | M | SspAAP62ORFEP (69% identity) | M1.Smi511283ORF9630P | |
| 9635 | deoxyhypusine synthase | |||
| 47815 | adenine glycosylase | |||
| 47820 | M | M.Hsp332ORF7925P (79% identity) | GANTC | M.Smi511283ORF47820P |
| 47825 | ribonuclease HII | |||
| 28010 | 322 aa hypothetical protein | |||
| 28015 | M | M.CspNUC1ORF870P (92% identity) | CGATCG | M.Smi511283ORF28015P |
| 28020 | deoxyribose-phosphate aldolase | |||
| 28560 | 3-hydroxyacid dehydrogenase | |||
| 28565 | M | M.Psp7327ORF4075P (77% identity) | GTCGAC | M.Smi511283ORF28565P |
| 28570 | R | Psp7327ORF4075P (88% identity) | GTCGAC | Smi511283ORF28565P |
| 28575 | 63 aa hypothetical protein | |||
| 33270 | pseudogene | |||
| 33275 | RM | Cth7203ORF5892P (76% identity) | Smi511283ORF33275P | |
| 33280 | 264 aa hypothetical protein | |||
| 24830 | 66 aa hypothetical protein | |||
| 24835 | RM | Rsp217ORFAP (39% identity) | Smi511283ORF24835P | |
| 24840 | helicase | |||
| 25220 | 179 aa hypothetical protein | |||
| 25225 | R | Cth7203ORF2728P (86% identity) | GCATGC | Smi511283ORF25230P |
| 25230 | M | M.Cth7203ORF2728P (93% identity) | GCATGC | M.Smi511283ORF25230P |
| 25235 | metallophosphoesterase | |||
| 35310 | 134 aa hypothetical protein, partial | |||
| 35315 | M | M.Cth7203ORF1565P (92% identity) | GATC | M.Smi511283ORF35315P |
| 35320 | 68 aa hypothetical protein | |||
| 37905 | 403 aa hypothetical protein | |||
| 37910 | M | M.Cth7203ORF4143P (93% identity) | CAGCTG | M.Smi511283ORF37910P |
| 37915 | 266 aa hypothetical protein | |||
| 38235 | dynamin family protein | |||
| 38240 | RM | CspNUC1ORF21310P (89% identity) | Smi511283ORF38240P | |
| 38245 | peptidase M50 | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5515 | 607 aa hypothetical protein | |||
| 5520 | M | M.MspMEM6ORF471P (66% identity) | M.Smi511283ORF5465P | |
| 5525 | R | Sba22271ORF15110P (84% identity) | Smi511283ORF5465P | |
| 5530 | 110 aa hypothetical protein | |||