Hassallia byssoidea VB512170 |
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Putative Hassallia byssoidea VB512170 RM systems
Ref: Singh,D. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19327
Contig set: 12,901,956 bp
GenBank #: JTCM00000000 (NZ_JTCM00000000)
REBASE acronym: Hby512170
Org_num: 15258
All begin PI95_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14885 | MerR family transcriptional regulator | |||
| 14890 | R | NspC052ORF27360P (93% identity) | Hby512170ORF14895P | |
| 14895 | M | M.Tsp7910ORF18555P (96% identity) | M.Hby512170ORF14895P | |
| 14900 | 214 aa hypothetical protein | |||
| 14905 | 74 aa hypothetical protein | |||
| 14910 | twitching motility protein PilT | |||
| 14915 | S | S.AflORF16945P (53% identity) | S.Hby512170ORF14895P | |
| 14920 | 71 aa hypothetical protein | |||
| 32090 | metal-dependent hydrolase | |||
| 32095 | R | Ssp4073ORF64400P (84% identity) | Hby512170ORF32115P | |
| 32100 | S | S.PspMAR2ORF5580P (28% identity) | S.Hby512170ORF32115P | |
| 32105 | 66 aa hypothetical protein | |||
| 32110 | 157 aa hypothetical protein | |||
| 32115 | M | M.Csp2100ORF40090P (92% identity) | M.Hby512170ORF32115P | |
| 32120 | 66 aa hypothetical protein | |||
| 44670 | ABC transporter | |||
| 44675 | S | S.Fjo09ORF1451P (34% identity) | S.Hby512170ORF44680P | |
| 44680 | M | M.Ksp4hORF1705P (69% identity) | M.Hby512170ORF44680P | |
| 44685 | R | AspTRM5ORF16750P (77% identity) | Hby512170ORF44680P | |
| 44690 | 307 aa hypothetical protein | |||
| 9990 | MerR family transcriptional regulator | |||
| 9995 | R | NspC057ORF9855P (81% identity) | Hby512170ORF10000P | |
| 10000 | M | M.Nsp4103ORF13740P (93% identity) | M.Hby512170ORF10000P | |
| 10005 | S | S.Nsp3756ORF43760P (56% identity) | S.Hby512170ORF10000P | |
| 10010 | histidine kinase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 27690 | methyltransferase | |||
| 27695 | R | NspMS1ORF43190P (86% identity) | GCATGC | Hby512170ORF27700P |
| 27700 | M | M.Cth7203ORF2728P (68% identity) | GCATGC | M.Hby512170ORF27700P |
| 27705 | NAD(FAD)-dependent dehydrogenase | |||
| 11435 | CopG family transcriptional regulator | |||
| 11440 | M | M.Mre10914ORFNP (81% identity) | GGYRCC | M.Hby512170ORF11440P |
| 11445 | heme iron utilization protein | |||
| 56560 | 339 aa hypothetical protein | |||
| 56565 | M | M.Ssp4073ORF49010P (78% identity) | RCCGGY | M.Hby512170ORF56565P |
| 56570 | deoxyribose-phosphate aldolase | |||
| 41165 | 247 aa hypothetical protein | |||
| 41170 | M | M.Hby512170ORF39155P (51% identity) | M.Hby512170ORF41170P | |
| 41175 | 517 aa hypothetical protein | |||
| 56670 | flagellar assembly protein H | |||
| 56675 | RM | Nsp7524ORF4960P (81% identity) | Hby512170ORF56675P | |
| 56680 | DNA-binding protein | |||
| 6200 | peptidase M28 | |||
| 6205 | M | M.Csp7103ORFRP (66% identity) | CYCGRG | M.Hby512170ORF6205P |
| 6210 | 223 aa hypothetical protein | |||
| 30325 | class I peptide chain release factor | |||
| 30330 | M | M.Nsp5183ORF1401P (84% identity) | CAGCTG | M.Hby512170ORF30330P |
| 30335 | prolyl endopeptidase | |||
| 48160 | 457 aa hypothetical protein | |||
| 48165 | M | M.Pmu1806ORFSP (59% identity) | M.Hby512170ORF48165P | |
| 48170 | PA-phosphatase | |||
| 57420 | pseudogene | |||
| 57425 | M | M.Csp4105ORF95530P (63% identity) | GRCGYC | M.Hby512170ORF57425P |
| 57430 | 161 aa hypothetical protein | |||
| 57540 | 160 aa hypothetical protein | |||
| 57545 | M | M.NspC052ORF29810P (58% identity) | GATC | M.Hby512170ORF57545P |
| 57550 | 68 aa hypothetical protein | |||
| 31815 | pseudogene | |||
| 31820 | M | M.Nsp210ORF4930P (78% identity) | GCGCGC | M.Hby512170ORF31820P |
| 31825 | membrane protein | |||
| 15605 | segregation protein A | |||
| 15610 | M | M2.Dco806ORF28270P (71% identity) | GGWCC | M.Hby512170ORF15610P |
| 15615 | apocytochrome f | |||
| 8200 | thylakoid lumen protein | |||
| 8205 | M | M.Ncf36ORF17090P (80% identity) | GGTNACC | M.Hby512170ORF8205P |
| 8210 | R | NspN6ORF4574P (82% identity) | GGTNACC | Hby512170ORF8205P |
| 8215 | poly(A) polymerase | |||
| 16370 | 338 aa hypothetical protein | |||
| 16375 | RM | Nsp926ORF16825P (71% identity) | Hby512170ORF16375P | |
| 16380 | methionine synthase | |||
| 17150 | low temperature requirement protein A | |||
| 17155 | M | M.Nsp0702ORF19265P (35% identity) | CTGCAG | M.Hby512170ORF17155P |
| 17160 | ATPase AAA | |||
| 9770 | 191 aa hypothetical protein | |||
| 9775 | M | M.Tca511288ORF22615P (88% identity) | GGWCC | M.Hby512170ORF9775P |
| 9780 | R | Fsp4106ORF7820P (25% identity) | GGWCC | Hby512170ORF9775P |
| 9785 | 191 aa hypothetical protein | |||
| 51440 | lipid-A-disaccharide synthase | |||
| 51445 | M | M.Tca511288ORF15105P (86% identity) | CGATCG | M.Hby512170ORF51445P |
| 51450 | aldo/keto reductase | |||
| 39150 | 286 aa hypothetical protein | |||
| 39155 | M | M.Hby512170ORF41170P (51% identity) | M.Hby512170ORF39155P | |
| 39160 | 542 aa hypothetical protein | |||
| 10240 | 84 aa hypothetical protein | |||
| 10245 | M | M.NspKEnORFEP (76% identity) | CCATGG | M.Hby512170ORF10245P |
| 10250 | R | NspKEnORFEP (84% identity) | CCATGG | Hby512170ORF10245P |
| 10255 | 75 aa hypothetical protein | |||
| 39310 | 86 aa hypothetical protein | |||
| 39315 | M | M.Smu11688ORF17565P (24% identity) | M.Hby512170ORF39315P | |
| 39320 | 190 aa hypothetical protein | |||
| 39620 | 105 aa hypothetical protein | |||
| 39625 | M | M2.MspA31ORF2484P (52% identity) | GCNNGC | M.Hby512170ORF39625P |
| 39630 | 166 aa hypothetical protein | |||
| 46170 | 60 aa hypothetical protein | |||
| 46175 | M | M.Fba3330ORF4755P (50% identity) | M1.Hby512170ORF46175P | |
| 46180 | M | M1.MspA31ORF2484P (59% identity) | M2.Hby512170ORF46175P | |
| 46185 | 101 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 22940 | 155 aa hypothetical protein | |||
| 22945 | M | M.Rba188ORF4353P (71% identity) | GGACCG | M.Hby512170ORF22945P |
| 22950 | R | Sse17993ORFCP (77% identity) | GGACCG | Hby512170ORF22945P |
| 22955 | 367 aa hypothetical protein | |||