Escherichia coli G8 |
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Putative Escherichia coli G8 RM systems
Ref: Zschuttig,A. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19319
GenBank #: JPKL00000000
REBASE acronym: Eco16448
Org_num: 15239
All begin EL80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1793 | 232 aa hypothetical protein | |||
| 1795 | M | M.EcoG8ORF10120P (100% identity) | M.Eco16448ORF1795P | |
| 1796 | S | S.EcoG8ORF10120P (100% identity) | S.Eco16448ORF1795P | |
| 1797 | protein YecA | |||
| 1798 | 594 aa hypothetical protein | |||
| 1799 | R | EcoG8ORF10120P (100% identity) | Eco16448ORF1795P | |
| 1800 | 251 aa hypothetical protein | |||
| ??? | pseudogene | |||
| 3870 | M | M.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | M.Eco16448ORF3870P |
| 3871 | S | S.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | S.Eco16448ORF3870P |
| ??? | R | EcoS88ORF4968P (100% identity) | AGCANNNNNNTGA | Eco16448ORF3870P |
| 3873 | Endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5060 | RM | EcoSO40ORF8270P (100% identity) | Eco16448ORF5060P | |
| 5061 | S | S.EcoSO40ORF8270P (100% identity) | S.Eco16448ORF5060P | |
| 5062 | 47 aa hypothetical protein | |||
| 4413 | R | Eho218ORF15P (100% identity) | GTCGAC | Eco16448ORF4414P |
| 4414 | M | M.SflFF22ORF10P (100% identity) | GTCGAC | M.Eco16448ORF4414P |
| 4415 | phage replication initiation protein | |||
| 5262 | 65 aa hypothetical protein | |||
| 5263 | M | M.EcoSCU103ORF10815P (100% identity) | M.Eco16448ORF5263P | |
| 5264 | Protein tolA | |||
| 5299 | 596 aa hypothetical protein | |||
| 5300 | M | M.EcoLR03ORF33110P (100% identity) | M.Eco16448ORF5300P | |
| 5301 | antitermination protein Q | |||
| 1735 | protein YedJ | |||
| 1736 | M | M.Ecos53DcmP (100% identity) | CCWGG | M.Eco16448DcmP |
| 1737 | V | V.EcostT2DcmP (100% identity) | V.Eco16448DcmP | |
| 1738 | transmembrane subunit | |||
| 1297 | 64 aa hypothetical protein | |||
| 1298 | M | N6-adenosine-methyltransferase MT-A70-like | GATC | M.Eco16448ORF1298P |
| 437 | protein YhdU | |||
| 438 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco16448ORF438P |
| 439 | DNA-binding protein Fis | |||
| 319 | Protein DamX | |||
| 320 | M | DNA adenine methylase | GATC | M.Eco16448DamP |
| 321 | Ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5243 | R | Eco16441McrBP (100% identity) | Eco16448McrBP | |
| 5244 | R | EcoG8McrCP (100% identity) | Eco16448McrCP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1561 | protein YfdN | |||
| 1562 | M | M.EcoG8ORF8555P (100% identity) | GATC | M.Eco16448ORF1562P |
| 1563 | LexA repressor | |||
| 2872 | 75 aa hypothetical protein | |||
| 2873 | M | M.EcoG8ORF16525P (100% identity) | GATC | M.Eco16448ORF2873P |
| 2874 | 78 aa hypothetical protein | |||