Escherichia coli G6/7 |
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Putative Escherichia coli G6/7 RM systems
Ref: Zschuttig,A. et al. Genome Announc 3 (2) (2015)
REBASE ref # 19319
GenBank #: JPMZ00000000
REBASE acronym: Eco16446
Org_num: 15240
All begin EL79_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1761 | 137 aa hypothetical protein | |||
| 1762 | M | M.EcoG8ORF10120P (100% identity) | M.Eco16446ORF1762P | |
| 1763 | S | S.EcoG8ORF10120P (100% identity) | S.Eco16446ORF1762P | |
| 1764 | protein YecA | |||
| 1765 | 594 aa hypothetical protein | |||
| 1766 | R | EcoG8ORF10120P (100% identity) | Eco16446ORF1762P | |
| 1767 | 251 aa hypothetical protein | |||
| ??? | pseudogene | |||
| 3926 | M | M.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | M.Eco16446ORF3926P |
| 3927 | S | S.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | S.Eco16446ORF3926P |
| ??? | R | EcoS88ORF4968P (100% identity) | AGCANNNNNNTGA | Eco16446ORF3926P |
| 3929 | Endoribonuclease symE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5107 | RM | EcoSO40ORF8270P (100% identity) | Eco16446ORF5107P | |
| 5108 | S | S.EcoSO40ORF8270P (100% identity) | S.Eco16446ORF5107P | |
| 5109 | 47 aa hypothetical protein | |||
| 5413 | 596 aa hypothetical protein | |||
| 5415 | M | M.EcoLR03ORF33110P (100% identity) | M.Eco16446ORF5415P | |
| 5416 | antitermination protein Q | |||
| 2202 | 33 aa hypothetical protein | |||
| 2203 | M | M.EcoSCU103ORF10815P (100% identity) | M.Eco16446ORF2203P | |
| 1704 | protein YedJ | |||
| 1705 | M | M.Ecos53DcmP (100% identity) | CCWGG | M.Eco16446DcmP |
| 1706 | V | V.EcostT2DcmP (100% identity) | V.Eco16446DcmP | |
| 1707 | transmembrane subunit | |||
| 326 | Protein DamX | |||
| 327 | M | DNA adenine methylase | GATC | M.Eco16446DamP |
| 328 | Ribulose-phosphate 3-epimerase | |||
| 4505 | 53 aa hypothetical protein | |||
| 4506 | R | Eho218ORF15P (100% identity) | GTCGAC | Eco16446ORF4507P |
| 4507 | M | M.SflFF22ORF10P (100% identity) | GTCGAC | M.Eco16446ORF4507P |
| 4508 | Replication protein A | |||
| 446 | protein YhdU | |||
| 447 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco16446ORF447P |
| 448 | DNA-binding protein Fis | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5103 | R | 362 aa hypothetical protein | Eco16446McrC2P | |
| 5057 | R | Kpn0718McrBP (65% identity) | Eco16446McrBP | |
| 5058 | R | 59 aa hypothetical protein | Eco16446McrCP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2975 | repressor LexA | |||
| 2976 | M | M.EcoG8ORF8555P (100% identity) | GATC | M.Eco16446ORF1540P |
| 2977 | protein yfdN | |||
| 2935 | 75 aa hypothetical protein | |||
| 2936 | M | M.EcoG8ORF16525P (100% identity) | GATC | M.Eco16446ORF2936P |
| 2937 | 78 aa hypothetical protein | |||
| 1539 | protein yfdN | |||
| 1540 | M | M.EcoG8ORF8555P (100% identity) | GATC | M.Eco16446ORF1540P |
| 1541 | repressor LexA | |||