Methanosarcina mazei LYC |
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Putative Methanosarcina mazei LYC RM systems
Ref: Henriksen,J.R. et al. unpublished
REBASE ref # 19423
Complete sequence: 4,154,344 bp
GenBank #: CP009513
REBASE acronym: MmaLYC
Org_num: 15332
All begin MSMAL_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 879 | Transcriptional regulator, TetR family | |||
| 880 | R | Mma16ORF863P (96% identity) | MmaLYCORF882P | |
| 881 | S | S.Mma16ORF863P (62% identity) | S.MmaLYCORF882P | |
| 882 | M | M.Mma16ORF863P (99% identity) | M.MmaLYCORF882P | |
| 883 | exonuclease, DNA ligase-associated | |||
| 1047 | 397 aa hypothetical protein | |||
| 1048 | M | M.MbaWORF3703P (90% identity) | M.MmaLYCORF1048P | |
| 1049 | S | S.MbaWORF3703P (87% identity) | S.MmaLYCORF1048P | |
| 1050 | R | MbaWORF3703P (90% identity) | MmaLYCORF1048P | |
| 1051 | filamentation induced by cAMP protein Fic | |||
| 1471 | 297 aa hypothetical protein | |||
| 1472 | R | MmaTMAORF18590P (98% identity) | MmaLYCORF1475P | |
| 1473 | 702 aa hypothetical protein | |||
| 1474 | S | S.Mso21ORFFP (100% identity) | S.MmaLYCORF1475P | |
| 1475 | M | M.Mmazm15ORF9225P (92% identity) | M.MmaLYCORF1475P | |
| 1476 | 320 aa hypothetical protein | |||
| 1481 | cytoplasmic protein | |||
| 1482 | M | M.MmaS6ORF1700P (100% identity) | M.MmaLYCORF1482P | |
| 1483 | PPOX class probable F420-dependent enzyme | |||
| 1626 | Flavodoxin | |||
| 1627 | R | MmaJL01ORF5200P (99% identity) | MmaLYCORF1633P | |
| 1628 | 385 aa hypothetical protein | |||
| 1629 | S | S.Mmazm15ORF8325P (58% identity) | S.MmaLYCORF1633P | |
| 1630 | 389 aa hypothetical protein | |||
| 1631 | 74 aa hypothetical protein | |||
| 1632 | 776 aa hypothetical protein | |||
| 1633 | M | M.Mmazm15ORF8325P (100% identity) | M.MmaLYCORF1633P | |
| 1634 | Exodeoxyribonuclease III | |||
| 1993 | 364 aa hypothetical protein | |||
| 1994 | M | M.MmaTMAORF6940P (100% identity) | M.MmaLYCORF1994P | |
| 1995 | S | S.MmaTMAORF6940P (100% identity) | S.MmaLYCORF1994P | |
| 1996 | 171 aa hypothetical protein | |||
| 1997 | 197 aa hypothetical protein | |||
| 1998 | 183 aa hypothetical protein | |||
| 1999 | 100 aa hypothetical protein | |||
| 2000 | R | MmaTMAORF6940P (100% identity) | MmaLYCORF1994P | |
| 2001 | 207 aa hypothetical protein | |||
| 2025 | 108 aa hypothetical protein | |||
| 2026 | R | MmaS6ORF2003P (99% identity) | MmaLYCORF2027P | |
| 2027 | M | M.MmaS6ORF2003P (99% identity) | M.MmaLYCORF2027P | |
| 2028 | S | S.BgoPr1dORF140P (37% identity) | S.MmaLYCORF2027P | |
| 2029 | 365 aa hypothetical protein | |||
| 2130 | Mg/Co/Ni transporter MgtE | |||
| 2131 | R | MmaGORF1669P (99% identity) | MmaLYCORF2134P | |
| 2132 | ATP-dependent DNA helicase | |||
| 2133 | S | S.Mma16ORF1434P (67% identity) | S.MmaLYCORF2134P | |
| 2134 | M | M.MmaTMAORF27060P (100% identity) | M.MmaLYCORF2134P | |
| 2135 | 336 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1025 | 697 aa hypothetical protein | |||
| 1026 | M | M.MmaTMAORF8300P (100% identity) | GGWCC | M.MmaLYCORF1026P |
| 1027 | V | V.MmaTMAORF8300P (100% identity) | V.MmaLYCORF1026P | |
| 1028 | 177 aa hypothetical protein | |||
| 1112 | 676 aa hypothetical protein | |||
| 1113 | M | M.MmaTMAORF9160P (100% identity) | CAGCTG | M.MmaLYCORF1113P |
| 1114 | 907 aa hypothetical protein | |||
| 1163 | nucleotide-binding protein | |||
| 1164 | RM | MmaS6ORF1172P (82% identity) | MmaLYCORF1164P | |
| 1165 | 779 aa hypothetical protein | |||
| 1845 | Dihydrolipoamide dehydrogenase | |||
| 1846 | RM | Mso21ORFEP (100% identity) | MmaLYCORF1846P | |
| 1847 | tRNA (guanine(37)-N1)-methyltransferase Trm5b | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1113 | PvuII DNA methyltransferase | |||
| 1114 | R | MmaTMAORF9190P (93% identity) | MmaLYCORF1116P | |
| 1115 | 115 aa hypothetical protein | |||
| 1116 | M | M.MmaS6ORF1105P (100% identity) | M.MmaLYCORF1116P | |
| 1117 | 236 aa hypothetical protein | |||
| 2619 | 276 aa hypothetical protein | |||
| 2620 | R | AspPN3ORF260P (64% identity) | MmaLYCORF2622P | |
| 2621 | DNA-binding protein in cluster with | |||
| 2622 | M | M.Ssp1026ORF10085P (45% identity) | M.MmaLYCORF2622P | |
| 2623 | DNA double-strand break repair protein Mre11 | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 79 | Peptidase M48, Ste24p precursor | |||
| 80 | R | Mmazm15MrrP (100% identity) | MmaLYCMrrP | |
| 81 | Bifunctional deaminase-reductase domain protein | |||
| 1153 | ATP-dependent DNA helicase pcrA | |||
| 1154 | R | Mso21McrBP (100% identity) | MmaLYCMcrBP | |
| 1155 | R | MmaS6McrCP (100% identity) | MmaLYCMcrCP | |
| 1156 | ATP-dependent protease | |||