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Putative Methanosarcina mazei S-6 RM systems
Ref: Henriksen,J.R. et al. unpublished
REBASE ref # 19423
Complete sequence: 4,142,816 bp
GenBank #: CP009512
REBASE acronym: MmaS6
Org_num: 15331
All begin MSMAS_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
548 | 266 aa hypothetical protein | |||
549 | R | MmaDAL1ORF2860P (70% identity) | MmaS6ORF551P | |
550 | S | S.PagS4ORF3140P (42% identity) | S.MmaS6ORF551P | |
551 | M | M.MmaDAL1ORF2860P (73% identity) | M.MmaS6ORF551P | |
552 | Type I restriction-modification system, | |||
551 | Type I restriction-modification system, | |||
552 | M | M.Bmy391ORF6585P (33% identity) | M.MmaS6ORF552P | |
553 | S | S2.Mar50ORF973P (36% identity) | S.MmaS6ORF552P | |
554 | 136 aa hypothetical protein | |||
871 | Transcriptional regulator, TetR family | |||
872 | R | MmaGORF429P (99% identity) | MmaS6ORF874P | |
873 | S | S.Mmazm15ORF4470P (100% identity) | S.MmaS6ORF874P | |
874 | M | M.MmaGORF429P (100% identity) | M.MmaS6ORF874P | |
875 | exonuclease, DNA ligase-associated | |||
1535 | Exodeoxyribonuclease III | |||
1536 | M | M.Mmazm15ORF8325P (100% identity) | M.MmaS6ORF1536P | |
1537 | 776 aa hypothetical protein | |||
1538 | 74 aa hypothetical protein | |||
1539 | 93 aa hypothetical protein | |||
1540 | 389 aa hypothetical protein | |||
1541 | S | S.MmaTMAORF16670P (100% identity) | S.MmaS6ORF1536P | |
1542 | R | Mma610ORF1488P (99% identity) | MmaS6ORF1536P | |
1543 | Flavodoxin | |||
1699 | PPOX class probable F420-dependent enzyme | |||
1700 | M | M.MmaLYCORF1482P (100% identity) | M.MmaS6ORF1700P | |
1701 | cytoplasmic protein | |||
1702 | 289 aa hypothetical protein | |||
1703 | cytoplasmic protein | |||
1704 | S | S.SspHRORF10315P (36% identity) | S.MmaS6ORF1700P | |
1705 | R | MmaGORF2981P (99% identity) | MmaS6ORF1700P | |
1706 | 68 aa hypothetical protein | |||
1970 | 364 aa hypothetical protein | |||
1971 | M | M.MmaTMAORF6940P (100% identity) | M.MmaS6ORF1971P | |
1972 | S | S.MmaTMAORF6940P (100% identity) | S.MmaS6ORF1971P | |
1973 | 171 aa hypothetical protein | |||
1974 | 197 aa hypothetical protein | |||
1975 | 196 aa hypothetical protein | |||
1976 | 100 aa hypothetical protein | |||
1977 | R | MmaTMAORF6940P (100% identity) | MmaS6ORF1971P | |
1978 | 207 aa hypothetical protein | |||
2001 | 108 aa hypothetical protein | |||
2002 | R | MmaGORF2704P (100% identity) | MmaS6ORF2003P | |
2003 | M | M.MmaGORF2704P (100% identity) | M.MmaS6ORF2003P | |
2004 | S | S2.Mma16ORF1113P (76% identity) | S.MmaS6ORF2003P | |
2005 | peptidase, M48 family | |||
2494 | metal-dependent hydrolase | |||
2495 | R | BsuTUB10ORF2675P (58% identity) | MmaS6ORF2498P | |
2496 | 1008 aa hypothetical protein | |||
2497 | S | S.Mae87ORF31360P (45% identity) | S.MmaS6ORF2498P | |
2498 | M | M.SspADCORF17930P (82% identity) | M.MmaS6ORF2498P | |
2499 | 276 aa hypothetical protein | |||
3000 | 336 aa hypothetical protein | |||
3001 | M | M.MmaGORF1669P (100% identity) | M.MmaS6ORF3001P | |
3002 | ATP-dependent DNA helicase RecG | |||
??? | S | S.MmaGORF1669P (100% identity) | S.MmaS6ORF3001P | |
3004 | ATPase involved in DNA repair | |||
3005 | 190 aa hypothetical protein | |||
3006 | 165 aa hypothetical protein | |||
3007 | 387 aa hypothetical protein | |||
3008 | 71 aa hypothetical protein | |||
3009 | R | MmaGORF1669P (99% identity) | MmaS6ORF3001P | |
3010 | Mg/Co/Ni transporter MgtE | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
1021 | Membrane alanine aminopeptidase N | |||
1022 | M | M.MmaGORF278P (100% identity) | M.MmaS6ORF1022P | |
1023 | A/G-specific adenine glycosylase | |||
1171 | ATP-dependent DNA helicase | |||
1172 | RM | MmaGORF156P (99% identity) | MmaS6ORF1172P | |
1173 | 785 aa hypothetical protein | |||
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
1102 | 290 aa hypothetical protein | |||
??? | R | Mma9314ORF1925P (70% identity) | MmaS6ORF1105P | |
1105 | M | M.MmaLYCORF1116P (100% identity) | M.MmaS6ORF1105P | |
1106 | 169 aa hypothetical protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
77 | Peptidase M48, Ste24p precursor | |||
78 | R | MmaGMrrP (100% identity) | MmaS6MrrP | |
79 | Bifunctional deaminase-reductase domain protein | |||
1159 | ATP-dependent DNA helicase pcrA | |||
1160 | R | Mso21McrBP (80% identity) | MmaS6McrBP | |
1161 | R | MmaLYCMcrCP (100% identity) | MmaS6McrCP | |
1162 | ATP-dependent protease |