Methanosarcina siciliae C2J |
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Putative Methanosarcina siciliae C2J RM systems
Ref: Henriksen,J.R. et al. unpublished
REBASE ref # 19423
Complete sequence: 5,427,890 bp
GenBank #: CP009508
REBASE acronym: MsiC2J
Org_num: 15328
All begin MSSAC_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1041 | cell surface protein | |||
| 1042 | M | M.MsiT4MORF937P (96% identity) | M.MsiC2JORF1042P | |
| 1043 | cytoplasmic protein | |||
| 1044 | S | S.AjoNCORF8315P (36% identity) | S.MsiC2JORF1042P | |
| 1045 | transposase, IS4 | |||
| 1046 | 301 aa hypothetical protein | |||
| 1047 | R | MsiT4MORF937P (94% identity) | MsiC2JORF1042P | |
| 1048 | metal-dependent hydrolase | |||
| 1339 | metal-dependent hydrolase | |||
| ??? | R | Mmazm15ORF7955P (87% identity) | MsiC2JORF1344P | |
| 1342 | S | S.Lbop42aORF17935P (40% identity) | S.MsiC2JORF1344P | |
| 1343 | cytoplasmic protein | |||
| 1344 | M | M.Msp596ORF1866P (90% identity) | M.MsiC2JORF1344P | |
| 1345 | Peptidyl-prolyl cis-trans isomerase | |||
| 1571 | 542 aa hypothetical protein | |||
| 1572 | R | HspLS2ORF11250P (75% identity) | MsiC2JORF1575P | |
| 1573 | 377 aa hypothetical protein | |||
| 1574 | S | S.Sya25ORFFP (26% identity) | S.MsiC2JORF1575P | |
| 1575 | M | M.MspLMO1ORF6715P (78% identity) | M.MsiC2JORF1575P | |
| 1576 | anaerobic ribonucleoside-triphosphate reductase | |||
| 1929 | Pentapeptide repeat family protein | |||
| 1930 | R | Mmazm15ORF10730P (91% identity) | MsiC2JORF1931P | |
| 1931 | M | M.MmaLYCORF2027P (96% identity) | M.MsiC2JORF1931P | |
| 1932 | S | S.Mso21ORFIP (54% identity) | S.MsiC2JORF1931P | |
| 1933 | 136 aa hypothetical protein | |||
| 2104 | ATPase | |||
| 2105 | M | M.MmaSarORF1450P (95% identity) | M.MsiC2JORF2105P | |
| 2106 | 74 aa hypothetical protein | |||
| 2107 | S | S.Mla7289ORF1760P (61% identity) | S.MsiC2JORF2105P | |
| 2108 | R | MacORF2103P (97% identity) | MsiC2JORF2105P | |
| 2109 | 299 aa hypothetical protein | |||
| 2116 | 254 aa hypothetical protein | |||
| 2117 | M | M.MsiT4MORF1584P (98% identity) | M.MsiC2JORF2117P | |
| 2118 | ATP-dependent DNA helicase | |||
| 2119 | S | S.MsiT4MORF1584P (70% identity) | S.MsiC2JORF2117P | |
| 2120 | ATP-dependent DNA helicase | |||
| 2121 | R | MacORF2116P (97% identity) | MsiC2JORF2117P | |
| 2122 | Fructokinase | |||
| 2136 | 42 aa hypothetical protein | |||
| 2137 | R | MmaGORF2198P (96% identity) | MsiC2JORF2142P | |
| 2138 | DNA-binding protein in cluster with | |||
| 2139 | 274 aa hypothetical protein | |||
| 2140 | S | S.MmaGORF2198P (76% identity) | S.MsiC2JORF2142P | |
| 2141 | 295 aa hypothetical protein | |||
| 2142 | M | M.MhoHB1ORF3128P (87% identity) | M.MsiC2JORF2142P | |
| 2143 | 267 aa hypothetical protein | |||
| 2405 | Type I restriction-modification system, | |||
| 2406 | S | S.Gpo436ORFEP (31% identity) | S.MsiC2JORF2405P | |
| 2407 | R | MspFTZ2ORF3600P (84% identity) | MsiC2JORF2405P | |
| 2408 | 697 aa hypothetical protein | |||
| 2435 | cell surface protein | |||
| 2436 | R | Msi350ORF2027P (99% identity) | MsiC2JORF2437P | |
| 2437 | M | M.Msi350ORF2027P (95% identity) | M.MsiC2JORF2437P | |
| 2438 | S | S.Msi350ORF2027P (64% identity) | S.MsiC2JORF2437P | |
| 2439 | 355 aa hypothetical protein | |||
| 2630 | 199 aa hypothetical protein | |||
| ??? | R | MsiT4MORF2211P (88% identity) | MsiC2JORF2631P | |
| 2633 | DNA topoisomerase I | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1731 | 634 aa hypothetical protein | |||
| 1732 | RM | Mso21ORFDP (73% identity) | MsiC2JORF1732P | |
| 1733 | 1212 aa hypothetical protein | |||
| 2703 | A/G-specific adenine glycosylase | |||
| 2704 | M | M.MsiT4MORF1242P (93% identity) | M.MsiC2JORF2704P | |
| 2705 | Membrane alanine aminopeptidase N | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1248 | Rubrerythrin | |||
| 1249 | R | Mla7289McrCP (85% identity) | MsiC2JMcrCP | |
| 1250 | R | Mla7289McrBP (86% identity) | MsiC2JMcrBP | |
| 1251 | 289 aa hypothetical protein | |||
| 4259 | Peptidase M48, Ste24p precursor | |||
| 4260 | R | MsiT4MMrrP (100% identity) | MsiC2JMrrP | |
| 4261 | Dihydrofolate reductase | |||