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Putative Vibrio cholerae 10432-62 RM systems
Ref: Johnson,S.L. et al. unpublished
REBASE ref # 19659
Complete sequence: 4,077,462 bp
GenBank #: CP010812
REBASE acronym: Vch10432
Org_num: 15373
All begin VAB027_
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
1459 | viral (Super1) RNA helicase family protein | |||
1460 | M | M.VchPS15ORF2542P (98% identity) | M.Vch10432ORF1460P | |
1461 | S | S.CspB72ORF19950P (71% identity) | S.Vch10432ORF1460P | |
1462 | R | Vch352303ORFBP (98% identity) | Vch10432ORF1460P | |
1463 | helix-turn-helix family protein | |||
1481 | pglZ domain protein | |||
1482 | S | S.VchSO5YORF9860P (100% identity) | S.Vch10432ORF1482P | |
1483 | 1012 aa hypothetical protein | |||
3651 | cro/C1-type HTH DNA-binding domain protein | |||
3652 | M | M.VchSa5YORF2649P (100% identity) | M.Vch10432ORF3652P | |
3653 | S | S.Pmi8ORF105P (100% identity) | S.Vch10432ORF3652P | |
3654 | AAA domain protein | |||
3655 | R | Pmi8ORF105P (99% identity) | Vch10432ORF3652P | |
3656 | histidine kinase-, DNA gyrase B-, and HSP90-like | |||
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
263 | AAA domain protein | |||
264 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch10432DamP |
265 | ribulose-phosphate 3-epimerase | |||
1235 | eco57I restriction-modification methylase family | |||
1236 | M | M.KspWEM22ORF2260P (94% identity) | M.Vch10432ORF1236P | |
1237 | integrase core domain protein | |||
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
2461 | 184 aa hypothetical protein | |||
2462 | R | VchSO5YMcrBP (99% identity) | Vch10432McrBP | |
2463 | R | VchVChf7McrCP (100% identity) | Vch10432McrCP | |
2464 | sel1 repeat family protein |