Frankia species DC12 |
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Putative Frankia species DC12 RM systems
Ref: Tisa,L.S. et al. unpublished
REBASE ref # 20273
Contig set: 6,883,236 bp
GenBank #: LANG00000000
REBASE acronym: Fsp12
Org_num: 9361
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | FspArI3ORFAP (85% identity) | Fsp12ORFEP | |
| ??? | S | S.Ssp590ORF6775P (39% identity) | S1.Fsp12ORFEP | |
| ??? | M | M1.Fsp12ORFHP (73% identity) | M.Fsp12ORFEP | |
| ??? | S | S.AspPoz14ORFCP (25% identity) | S2.Fsp12ORFEP | |
| ??? | 723 aa hypothetical protein | |||
| ??? | 480 aa hypothetical protein | |||
| ??? | M | M2.Fsp12ORFHP (18% identity) | M.Fsp12ORFFP | |
| ??? | R | Fsp512ORFCP (68% identity) | Fsp12ORFNP | |
| ??? | S | S.Ksp5ORF20955P (36% identity) | S.Fsp12ORFNP | |
| ??? | M | M.Fsp36ORF6980P (70% identity) | M.Fsp12ORFNP | |
| ??? | M | M1.FspCpI1SORF5489P (62% identity) | M2.Fsp12ORFHP | |
| ??? | M | M.Fsp36ORF7050P (68% identity) | M1.Fsp12ORFHP | |
| ??? | S | S.FspCpI1SORF5489P (34% identity) | S.Fsp12ORFHP | |
| ??? | R | Fsp12ORFEP (91% identity) | Fsp12ORFHP | |
| ??? | M | M.FspQA3ORFGP (71% identity) | M.Fsp12ORFUP | |
| ??? | M | M.FspCN3ORF3793P (79% identity) | M.Fsp12ORFPP | |
| ??? | S | S.Mri1ORF12905P (46% identity) | S.Fsp12ORFPP | |
| ??? | R | Fsp16386ORF10370P (73% identity) | Fsp12ORFPP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | RM | Fsp512ORFKP (67% identity) | Fsp12ORFCP | |
| ??? | M | M.Fsp523ORF693P (70% identity) | GATC | M.Fsp12ORFJP |
| ??? | RM | Shy1717ORF6801P (23% identity) | Fsp12ORFDP | |
| ??? | M | M.FspCN3ORF5061P (81% identity) | CCCGGG | M.Fsp12ORFTP |
| ??? | RM | FspCN3ORF4727P (54% identity) | Fsp12ORFAP | |
| ??? | R | SalLBX2ORFBP (57% identity) | GCGGCCGC | Fsp12ORFOP |
| ??? | M | M.SalLBX2ORFAP (64% identity) | CGGCCG | M.Fsp12ORFOP |
| ??? | V | V.Pen31784ORF13770P (16% identity) | V.Fsp12ORFOP | |
| ??? | M | M.FspEUIORF7071P (89% identity) | M.Fsp12ORFMP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | FspEMrr2P (62% identity) | Fsp12MrrP | |
| ??? | R | Dsp37MrrP (58% identity) | Fsp12Mrr3P | |