Halomonas species KO116 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Halomonas species KO116 RM systems
Ref: O'Dell,K.B. et al. unpublished
REBASE ref # 19687
| Sequence length: | GenBank #: | |
| Chromosome: | 4,649,248 bp | CP011052 |
| plasmid unnamed1: | 313,995 bp | CP011053 |
| plasmid unnamed2: | 205,117 bp | CP011054 |
REBASE acronym: Hsp116
Org_num: 15383
All begin KO116_, KO116_P
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 86 | 141 aa hypothetical protein | |||
| 87 | S | S.MhyYB03ORF820P (51% identity) | GATNNNNNNCTTGY | S.Hsp116I |
| 88 | M | M.MspM4CORF135P (84% identity) | GATNNNNNNCTTGY | M.Hsp116I |
| 89 | R | HspPA169ORF16095P (96% identity) | GATNNNNNNCTTGY | Hsp116IP |
| 90 | protein of unknown function DUF1016 | |||
| 1510 | 476 aa hypothetical protein | |||
| 1511 | R | Hsp149ORF9335P (90% identity) | CCANNNNNNNNGTCG | Hsp116IIP |
| 1512 | M | M.Hsp149ORF9335P (94% identity) | CCANNNNNNNNGTCG | M.Hsp116II |
| 1513 | S | S.HspGFAJORF8087P (65% identity) | CCANNNNNNNNGTCG | S.Hsp116II |
| 1514 | 215 aa hypothetical protein | |||
| 3067 | protein of unknown function DUF45 | |||
| 3068 | R | HspN32AORF18120P (95% identity) | GATNNNNNNTGAA | Hsp116IIIP |
| 3069 | Protein of unknown function DUF3368 | |||
| 3070 | transcriptional regulator, XRE family | |||
| 3071 | S | S.Cpo15ORFCP (45% identity) | GATNNNNNNTGAA | S.Hsp116III |
| 3072 | M | M.HspN32AORF18120P (97% identity) | GATNNNNNNTGAA | M.Hsp116III |
| 3073 | thioesterase domain protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1304 | 99 aa hypothetical protein | |||
| 1305 | RM | HsoCKY01ORFAP (73% identity) | Hsp116ORF1305P | |
| 1306 | 310 aa hypothetical protein | |||
| 2355 | 455 aa hypothetical protein | |||
| 2356 | RM | HspL1ORF9000P (76% identity) | Hsp116ORF2356P | |
| 2357 | SMF family protein | |||
| 3179 | 56 aa hypothetical protein | |||
| 3180 | M | M.HspFeN2ORF17770P (90% identity) | M.Hsp116ORF3180P | |
| 3181 | 430 aa hypothetical protein | |||
| plasmid unnamed2 | ||||
| 200036 | phosphoadenosine phosphosulfate reductase | |||
| 200037 | M | M.HveP1ORFCP (100% identity) | M.Hsp116ORF200037P | |
| 200038 | 157 aa hypothetical protein | |||
| 200104 | SNF2-related protein | |||
| 200105 | M | M.HveP1ORFEP (100% identity) | M.Hsp116ORF200105P | |
| 200106 | Protein of unknown function DUF3780 | |||
| 200185 | 92 aa hypothetical protein | |||
| ??? | M | C-5 cytosine-specific DNA methylase | M.Hsp116ORF200186P | |
| 200188 | 371 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 3040 | FRG domain protein | |||
| 3041 | R | HziB6ORFCP (80% identity) | Hsp116ORF3042P | |
| 3042 | M | M.Bbr588I (65% identity) | M.Hsp116ORF3042P | |
| 3043 | Protein of unknown function DUF4391 | |||
| plasmid unnamed1 | ||||
| 100331 | 61 aa hypothetical protein | |||
| 100332 | R | HspA3H3ORF40010P (92% identity) | Hsp116ORF100333P | |
| 100333 | M | M.Psp3P5ORF15665AP (57% identity) | M.Hsp116ORF100333P | |
| 100335 | pseudogene | |||