Geobacter sulfurreducens AM-1 |
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Putative Geobacter sulfurreducens AM-1 RM systems
Ref: Arkhipova,O.V. et al. unpublished
REBASE ref # 19433
Complete sequence: 4,566,144 bp
GenBank #: CP010430
REBASE acronym: GsuAM1
Org_num: 15368
All begin RW64_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1660 | restriction endonuclease | |||
| 1665 | R | MspP4B1ORF11705P (92% identity) | GsuAM1ORF1675P | |
| 1670 | S | S.Apa12260II (83% identity) | S.GsuAM1ORF1675P | |
| 1675 | M | M.Dal16529ORF2753P (90% identity) | M.GsuAM1ORF1675P | |
| 1680 | transcriptional regulator | |||
| 3970 | 480 aa hypothetical protein | |||
| 3975 | R | AspHO1ORF2820P (91% identity) | GsuAM1ORF3990P | |
| 3980 | 636 aa hypothetical protein | |||
| 3985 | S | S.LspCJ11ORF3400P (79% identity) | S.GsuAM1ORF3990P | |
| 3990 | M | M.Sth21645ORF15200P (88% identity) | M.GsuAM1ORF3990P | |
| 3995 | 296 aa hypothetical protein | |||
| 8355 | 116 aa hypothetical protein | |||
| 8360 | M | M.TspPSB1VIII (74% identity) | M.GsuAM1ORF8360P | |
| 8365 | S | S.SspHK05ORF54260P (31% identity) | S.GsuAM1ORF8360P | |
| 8370 | 202 aa hypothetical protein | |||
| 8375 | 334 aa hypothetical protein | |||
| 8380 | R | Pxi51270ORF1133P (80% identity) | GsuAM1ORF8360P | |
| 8385 | zinc metalloprotease | |||
| 9190 | 109 aa hypothetical protein | |||
| 9195 | R | Dli5ac10ORF27860P (63% identity) | GsuAM1ORF9200P | |
| 9200 | M | M.Psp20439ORF2227P (60% identity) | M.GsuAM1ORF9200P | |
| 9205 | S | S.Mae88ORF15010P (31% identity) | S.GsuAM1ORF9200P | |
| 9210 | 280 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3355 | 72 aa hypothetical protein | |||
| ??? | M | M.GsuPLORF12420P (100% identity) | CCTNAGG | M.GsuAM1ORFAP |
| 3360 | R | GsuPLORF12420P (100% identity) | CCTNAGG | GsuAM1ORFAP |
| 3365 | 95 aa hypothetical protein | |||
| 3375 | transposase | |||
| ??? | M | M.Cra508ORF13550P (58% identity) | AAGCTT | M.GsuAM1ORFBP |
| 3380 | transposase | |||
| 3790 | RNA polymerase subunit sigma | |||
| 3795 | M | M2.Sth15264ORF7990P (99% identity) | M1.GsuAM1ORF3795P | |
| 3800 | M | M1.Sth15264ORF7990P (98% identity) | M2.GsuAM1ORF3795P | |
| 3805 | 122 aa hypothetical protein | |||
| 9655 | toxin Fic | |||
| 9660 | RM | GanSD1ORF8455P (49% identity) | GsuAM1ORF9660P | |
| 9665 | helicase | |||
| 10360 | lactate permease | |||
| 10365 | M | M.GsuYM35ORF1215P (99% identity) | M.GsuAM1ORF10365P | |
| 10370 | peptidylprolyl isomerase | |||
| 17285 | 110 aa hypothetical protein | |||
| 17290 | RM | Pca24390ORFAP (77% identity) | GsuAM1ORF17290P | |
| 17295 | 573 aa hypothetical protein | |||
| 17890 | protein kinase | |||
| 17895 | S | S.Mth9ORF3645P (77% identity) | S.GsuAM1ORF17900P | |
| 17900 | M | M2.PspZM23ORF6590P (96% identity) | M1.GsuAM1ORF17900P | |
| 17905 | M | M2.Asp1403ORF11445P (97% identity) | M2.GsuAM1ORF17900P | |
| 17910 | DNA-binding protein | |||
| 18130 | 121 aa hypothetical protein | |||
| 18135 | M | M.GsuRed1ORF10075P (98% identity) | GGATC | M.GsuAM1ORF18135P |
| 18140 | DNA binding domain protein, excisionase family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1655 | 245 aa hypothetical protein | |||
| 1660 | R | GhaSAP1MrrP (84% identity) | GsuAM1MrrP | |
| 1665 | DEAD/DEAH box helicase | |||
| 8405 | 673 aa hypothetical protein | |||
| 8410 | R | Vae19650McrBP (25% identity) | GsuAM1McrBP | |
| 8415 | R | EsaPCHMcrC3P (32% identity) | GsuAM1McrCP | |
| 8420 | 347 aa hypothetical protein | |||
| 16410 | NUDIX hydrolase | |||
| 16415 | R | GsuYM18ORF1335P (91% identity) | GsuAM1ORF16415P | |
| 16420 | transposase | |||
| 20510 | transposase | |||
| 20515 | R | GsuPORF1359P (93% identity) | GsuAM1ORF20515P | |
| 20520 | ATPase AAA | |||