Salmonella enterica subsp. enterica serovar Typhimurium NCTC13348 |
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Putative Salmonella enterica subsp. enterica serovar Typhimurium NCTC13348 RM systems
Ref: Informatics,Pathogen. unpublished
REBASE ref # 22501
| Sequence length: | GenBank #: | |
| chromosome 1: | 3,458,333 bp | LN829401 |
| plasmid 2: | 1,105,228 bp | LN829402 |
| plasmid 5: | 94,033 bp | LN829405 |
REBASE acronym: Sen13348
Org_num: 15376
All begin ERS450001_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3017 | restriction endonuclease | |||
| 3018 | R | StyUK1IIP (100% identity) | GAGNNNNNNRTAYG | Sen13348IP |
| 3019 | M | M.StyLTIII (100% identity) | GAGNNNNNNRTAYG | M.Sen13348I |
| 3020 | S | S.StyUK1II (100% identity) | GAGNNNNNNRTAYG | S.Sen13348I |
| 3022 | membrane protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 109 | phage protein | |||
| ??? | M | M.Sty13348ORF110P (100% identity) | GATC | M.Sen13348ORF110P |
| 112 | crossover junction endodeoxyribonuclease | |||
| 776 | phage protein | |||
| 777 | M | M.StyUK1V (100% identity) | GATC | M.Sen13348ORF777P |
| 778 | crossover junction endodeoxyribonuclease | |||
| 823 | metal-dependent phospho hydrolase | |||
| 824 | M | M.StyUK1Dcm (100% identity) | CCWGG | M.Sen13348DcmP |
| 825 | V | patch repair protein | V.Sen13348DcmP | |
| 826 | inner membrane transporter yedA | |||
| 3052 | DNA repair ATPase | |||
| 3053 | RM | StyUK1IV (100% identity) | GATCAG | Sen13348III |
| 3054 | spermidine/putrescine ABC transporter ATPase | |||
| plasmid 2 | ||||
| 3757 | DamX protein | |||
| 3758 | M | DNA adenine methylase | GATC | M.Sen13348DamP |
| 3759 | ribulose-phosphate 3-epimerase | |||
| 3856 | protein yhdU | |||
| 3857 | M | methyltransferase | ATGCAT | M.Sen13348ORF3857P |
| 3858 | Fis DNA-binding protein | |||
| plasmid 5 | ||||
| 4931 | cytoplasmic protein | |||
| 4932 | M | M.StyUK1ORFAP (100% identity) | M.Sen13348ORF4932P | |
| 4933 | cytoplasmic protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 2514 | cytoplasmic protein | |||
| 2515 | R | StyUK1IP (99% identity) | CAGAG | Sen13348IIP |
| 2516 | M | M.StyUK1I (100% identity) | CAGAG | M.Sen13348II |
| 2517 | metabolite transport protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| chromosome 1 | ||||
| 3016 | membrane protein | |||
| 3017 | R | StyUK1MrrP (100% identity) | Sen13348Mrr2P | |
| 3018 | type I restriction enzyme EcoKI subunit R | |||