Polycyclovorans algicola TG408 |
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Putative Polycyclovorans algicola TG408 RM systems
Ref: Whitman,W. et al. unpublished
REBASE ref # 19552
Contig set: 3,653,213 bp
GenBank #: JOMH00000000 (NZ_JOMH00000000)
REBASE acronym: Pal408
Org_num: 12099
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | MvaIT4ORFGP (70% identity) | CTANNNNNNTTT | Pal408IIIP |
| ??? | S | S.Kgl21I (43% identity) | CTANNNNNNTTT | S.Pal408III |
| ??? | M | M.MspSC29ORF15685P (61% identity) | CTANNNNNNTTT | M.Pal408III |
| ??? | S | S.MmiET2ORF2419P (46% identity) | S.Pal408ORFKP | |
| ??? | M | M.Fsp911ORF8445P (63% identity) | M.Pal408ORFKP | |
| ??? | R | Rsp115ORF12068P (56% identity) | Pal408ORFKP | |
| ??? | 283 aa hypothetical protein | |||
| ??? | M | M.Lsp171ORF3075P (77% identity) | M.Pal408ORFFP | |
| ??? | S | S.Bba10ORF19420P (44% identity) | S.Pal408ORFFP | |
| ??? | R | Lsp171ORF2890P (60% identity) | Pal408ORFFP | |
| ??? | M | M.Are18626ORF15045P (85% identity) | GGANNNNNNNNTCGA | M.Pal408IV |
| ??? | S | S.Hha1059ORF1247P (57% identity) | GGANNNNNNNNTCGA | S.Pal408IV |
| ??? | R | MgrR3S1ORF33400P (74% identity) | GGANNNNNNNNTCGA | Pal408IVP |
| ??? | R | Csp13ORF18015P (92% identity) | GATNNNNNNTTGG | Pal408IIP |
| ??? | M | M.Axy915ORF9895P (90% identity) | GATNNNNNNTTGG | M.Pal408II |
| ??? | S | S.Psy3272ORF22625P (48% identity) | GATNNNNNNTTGG | S.Pal408II |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | M.AspCIBORF130P (23% identity) | CCWGG | Pal408ORFNP |
| ??? | RM | PstST9ORF6125P (53% identity) | CCRTGAG | Pal408I |
| ??? | M | M.Asp16355ORF18555P (39% identity) | M.Pal408ORFGP | |
| ??? | N-6 DNA methylase | |||
| ??? | R | Rba636ORFBP (33% identity) | CCWGG | Pal408ORFEP |
| ??? | V | V.AbaDC25ORF21460P (55% identity) | V.Pal408ORFEP | |
| ??? | M | M.TspTA1ORF7625P (63% identity) | CCWGG | M.Pal408ORFEP |
| ??? | M | M.Aar1253ORFCP (33% identity) | GGTACC | M.Pal408ORFCP |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | BbaAGun1ORFDP (70% identity) | Pal408ORFMP | |
| ??? | M | M.BthE254ORF952P (45% identity) | M.Pal408ORFMP | |
| ??? | M | M2.Msp28654ORF18645P (38% identity) | M.Pal408ORFIP | |
| ??? | R | TdeDORF1491P (76% identity) | Pal408ORFIP | |