|
Putative Gillisia sp. JM1 RM systems
Ref: Grzymski,J.J. et al. unpublished
REBASE ref # 19277
Contig set: 4,114,490 bp
GenBank #: AUKH00000000 (NZ_AUKH00000000)
REBASE acronym: GspJM1
Org_num: 9798
All begin
Type I | ||||
---|---|---|---|---|
ORF | Gene | Most similar | Specificity | Name |
??? | M | M.Afl52984ORF6400P (84% identity) | ACTANNNNNNNTANYC | M.GspJM1V |
??? | S | S.Mpl155ORF620P (43% identity) | ACTANNNNNNNTANYC | S.GspJM1V |
??? | R | Afl52984ORF6400P (84% identity) | ACTANNNNNNNTANYC | GspJM1VP |
??? | R | LspWUR7ORF16560P (85% identity) | RTAGNNNNNNRTGG | GspJM1IIIP |
??? | M | M.Cly9ORF4610P (90% identity) | RTAGNNNNNNRTGG | M.GspJM1III |
??? | S | S.Acr1AR4ORF5755P (39% identity) | RTAGNNNNNNRTGG | S.GspJM1III |
??? | M | M.Oho17368ORF3274P (89% identity) | TAAAYNNNNNNCTG | M.GspJM1II |
??? | S | S.Vfl12605ORFAP (38% identity) | TAAAYNNNNNNCTG | S.GspJM1II |
??? | R | AsaSP2ORF15325P (67% identity) | TAAAYNNNNNNCTG | GspJM1IIP |
??? | M | M.Bsp14AI (79% identity) | AAGNNNNNNCTTC | M.GspJM1I |
??? | S | S.Bsp14AI (49% identity) | AAGNNNNNNCTTC | S.GspJM1I |
??? | R | MspLL1ORF19230P (71% identity) | AAGNNNNNNCTTC | GspJM1IP |
Type II | ||||
ORF | Gene | Most similar | Specificity | Name |
??? | RM | Mae9806ORF860013P (29% identity) | GspJM1ORFQP | |
??? | V | V.WspSW133ORFAP (51% identity) | V.GspJM1ORFJP | |
??? | R | WspJ142ORF7555P (73% identity) | GGNCC | GspJM1ORFJP |
??? | M | M.WspJ142ORF7555P (81% identity) | GGNCC | M.GspJM1ORFJP |
??? | C | XRE family transcriptional regulator | C.GspJM1ORFOP | |
??? | 1007 aa hypothetical protein, partial | |||
??? | XRE family transcriptional regulator | |||
??? | R | AspCCBEORF2640P (60% identity) | GspJM1ORFPP | |
??? | RM | GspJM1ORFNP (59% identity) | GspJM1ORFAP | |
??? | RM | GspJM1ORFAP (59% identity) | GspJM1ORFNP | |
Type III | ||||
ORF | Gene | Most similar | Specificity | Name |
??? | M | M.Afl52984ORF12720P (30% identity) | M.GspJM1ORFMP | |
??? | type III site-specific deoxyribonuclease, restriction subunit | |||
??? | 424 aa hypothetical protein, partial | |||
??? | R | Afl52984ORF12720P (77% identity) | GspJM1ORFRP | |
Type IV | ||||
ORF | Gene | Most similar | Specificity | Name |
??? | R | FfaWV33ORF12875P (81% identity) | GspJM1ORFFP |