[Clostridium] clariflavum 4-2a |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative [Clostridium] clariflavum 4-2a RM systems
Ref: Izquierdo,J. et al. unpublished
REBASE ref # 20107
Contig set: 4,871,948 bp
GenBank #: ASAA00000000 (NZ_ASAA00000000)
REBASE acronym: Ccl42a
Org_num: 9800
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HspSDIDORF1569P (97% identity) | Ccl42aORFCP | |
| ??? | S | S.HspSDIDORF1569P (60% identity) | S.Ccl42aORFCP | |
| ??? | M | M.HspSDIDORF1569P (97% identity) | M.Ccl42aORFCP | |
| ??? | S | S.TstRKWS1ORF1839P (63% identity) | CNAYNNNNCTC | S.Ccl42aIII |
| ??? | M | M.HsaGGR1ORF15155P (92% identity) | CNAYNNNNCTC | M.Ccl42aIII |
| ??? | R | HspSDIDORF751P (95% identity) | CNAYNNNNCTC | Ccl42aIIIP |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M1.HmoORF2890P (95% identity) | M1.Ccl42aORFEP | |
| ??? | M | M1.DtuL3ORF1121P (95% identity) | M2.Ccl42aORFEP | |
| ??? | DNA methylase N-4 | |||
| ??? | R | CthORF1513P (85% identity) | GATC | Ccl42aORFIP |
| ??? | restriction endonuclease subunit M clariflavum] | |||
| ??? | M | M1.RthAD2ORF2306P (80% identity) | M.Ccl42aORFHP | |
| ??? | type II restriction endonuclease | |||
| ??? | type II restriction endonuclease | |||
| ??? | M | M2.RthAD2ORF2306P (75% identity) | GATC | M.Ccl42aII |
| ??? | M | M.Ccl42aORFJP (93% identity) | M.Ccl42aORFAP | |
| ??? | M | M.Ccl19732ORF377P (90% identity) | ATGCAT | M.Ccl42aI |
| ??? | RM | Ccl19732ORF2932P (99% identity) | Ccl42aORFBP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | TbaSKG1ORF4410P (93% identity) | Ccl42aORFGP | |
| ??? | M | M.TbaSKG1ORF4410P (83% identity) | M.Ccl42aORFGP | |
| ??? | M | M.Ccl42aORFAP (93% identity) | M.Ccl42aORFJP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Ccl19732McrCP (100% identity) | Ccl42aMcrCP | |
| ??? | R | Ccl19732McrBP (100% identity) | Ccl42aMcrBP | |