Geminocystis species NIES-3709 |
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Putative Geminocystis species NIES-3709 RM systems
Ref: Hirose,Y. unpublished
REBASE ref # 19713
| Sequence length: | GenBank #: | |
| Chromosome: | 4,150,181 bp | AP014821 |
| plasmid pGM3709_01: | 41,943 bp | AP014822 |
| plasmid pGM3709_02: | 29,076 bp | AP014823 |
| plasmid pGM3709_03: | 49,712 bp | AP014824 |
| plasmid pGM3709_05: | 32,475 bp | AP014826 |
| plasmid pGM3709_08: | 10,930 bp | AP014829 |
REBASE acronym: Gsp3709
Org_num: 15138
All begin GM3709_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1381 | 58 aa hypothetical protein | |||
| 1382 | S | type I restriction-modification system | S.Gsp3709ORF1375P | |
| 1383 | R | Gsp3708ORF3309P (95% identity) | Gsp3709ORF1375P | |
| 1384 | 157 aa hypothetical protein | |||
| plasmid pGM3709_01 | ||||
| 3687 | 329 aa hypothetical protein | |||
| 3688 | M | M.CspB1200ORF13530P (92% identity) | M.Gsp3709ORF3688P | |
| 3689 | 218 aa hypothetical protein | |||
| 3690 | 46 aa hypothetical protein | |||
| 3691 | S | S.MaeLE3ORF7145P (58% identity) | S.Gsp3709ORF3688P | |
| 3692 | 75 aa hypothetical protein | |||
| 3693 | membrane protein | |||
| 3694 | helix-turn-helix motif | |||
| 3695 | R | Pru7821ORF3425P (30% identity) | Gsp3709ORF3688AP | |
| 3696 | mobile element protein | |||
| 3697 | R | CspB1200ORF13530P (49% identity) | Gsp3709ORF3688BP | |
| 3698 | 51 aa hypothetical protein | |||
| plasmid pGM3709_02 | ||||
| 3727 | predicted protein | |||
| 3728 | M | M.Cap1201ORF16300P (84% identity) | M.Gsp3709ORF3728P | |
| 3729 | 136 aa hypothetical protein | |||
| 3730 | 72 aa hypothetical protein | |||
| 3731 | 139 aa hypothetical protein | |||
| 3732 | S | S.CspB1200ORF13090P (63% identity) | S.Gsp3709ORF3728P | |
| 3733 | 214 aa hypothetical protein | |||
| 3734 | 416 aa hypothetical protein | |||
| 3735 | R | Cap1201ORF16300P (94% identity) | Gsp3709ORF3728P | |
| 3736 | probable large ATP-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 21 | flavodoxin reductases (ferredoxin-NADPH | |||
| 22 | M | M.EnaZM001ORF9165P (60% identity) | GATC | M.Gsp3709ORF22P |
| 23 | 179 aa hypothetical protein | |||
| 678 | USG protein | |||
| 679 | RM | MaeS298ORF2685BP (45% identity) | Gsp3709ORF679P | |
| 680 | 159 aa hypothetical protein | |||
| 779 | 213 aa hypothetical protein | |||
| 780 | M | M.Cap3222ORF11975P (86% identity) | GCGC | M.Gsp3709ORF780P |
| 781 | 123 aa hypothetical protein | |||
| 1245 | DNA mismatch repair protein MutS | |||
| 1246 | M | M.FspA8ORF8555P (75% identity) | CAGCTG | M.Gsp3709ORF1246P |
| 1247 | R | Ath12881ORFDP (59% identity) | CAGCTG | Gsp3709ORF1246P |
| 1248 | sugar transferase | |||
| 2270 | 44 aa hypothetical protein | |||
| 2271 | R | Cspa4ORF3785P (71% identity) | TCTAGA | Gsp3709ORF2272P |
| 2272 | M | M.Cap3222ORF17645P (89% identity) | TCTAGA | M.Gsp3709ORF2272P |
| 2273 | 67 aa hypothetical protein | |||
| 3390 | DNA-cytosine methyltransferase | |||
| 3391 | M | M.Gsp3708ORF3319P (33% identity) | CGATCG | M.Gsp3709ORF3391P |
| 3392 | RelE/StbE replicon stabilization toxin | |||
| plasmid pGM3709_05 | ||||
| 3870 | 59 aa hypothetical protein | |||
| 3871 | M | M.MpuKS1ORF233P (5% identity) | CTSAG | M.Gsp3709ORF3871P |
| 3872 | 69 aa hypothetical protein | |||
| plasmid pGM3709_08 | ||||
| 3927 | 135 aa hypothetical protein | |||
| 3928 | M | M.Sto24ORF24195P (62% identity) | GGNNCC | M.Gsp3709ORF3928P |
| 3929 | R | Scy7437ORF2443P (34% identity) | GGNNCC | Gsp3709ORF3928P |
| 3930 | mobile element protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| plasmid pGM3709_03 | ||||
| 3752 | 68 aa hypothetical protein | |||
| 3753 | R | restriction enzyme LlaI protein | Gsp3709McrBP | |
| 3754 | 581 aa hypothetical protein | |||