Helicobacter pylori ML2 |
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Putative Helicobacter pylori ML2 RM systems
Ref: Wang,H.-C. et al. unpublished
REBASE ref # 19579
Complete sequence: 1,562,125 bp
GenBank #: AP014711
REBASE acronym: HpyML2
Org_num: 15089
All begin
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| ??? | M | M.Hpy193ORFKP (94% identity) | M.HpyML2ORFUP | |
| ??? | S | S.HpySH014XIII (96% identity) | S.HpyML2ORFUP | |
| ??? | R | HpyP30ORFTP (95% identity) | HpyML2ORFUP | |
| ??? | S | S.HpyOK311ORFC1P (48% identity) | S.HpyML2ORFSP | |
| ??? | R | HpyH137ORF5315P (93% identity) | HpyML2ORFMP | |
| ??? | M | M.Hpyfe58ORF5150P (97% identity) | M.HpyML2ORFMP | |
| ??? | S | S.HpyAR9ORF2470P (97% identity) | S.HpyML2ORFMP | |
| ??? | R | HpyP88ORFOP (97% identity) | HpyML2ORFDP | |
| ??? | M | M.HpyMA15XI (96% identity) | M.HpyML2ORFDP | |
| ??? | S | S.Hpyfe88ORF7480P (39% identity) | S1.HpyML2ORFDP | |
| ??? | S | S.Hpyfe70ORF7585P (57% identity) | S2.HpyML2ORFDP | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | HpyUM023ORF4605P (52% identity) | CATG | HpyML2ORFYP |
| ??? | M | M.HpyOK34ORFA1P (99% identity) | CATG | M.HpyML2ORFYP |
| ??? | M | M.HpyML1ORFA1P (99% identity) | GCGC | M.HpyML2ORFXP |
| ??? | R | Hpyfe59ORF2060P (99% identity) | TCNNGA | HpyML2ORFWP |
| ??? | M | M.HpyKH36ORFYP (94% identity) | TCNNGA | M.HpyML2ORFWP |
| ??? | M | M.Hpyfe66ORF2700P (91% identity) | GTNNAC | M.HpyML2ORFVP |
| ??? | R | Hpy199ORFRP (97% identity) | GTNNAC | HpyML2ORFVP |
| ??? | R | HpyTW23ORF3330P (81% identity) | GGNNCC | HpyML2ORFRP |
| ??? | M | M.HpyTW09ORF3375P (99% identity) | GGNNCC | M.HpyML2ORFRP |
| ??? | RM | HpyKG5ORF3430P (49% identity) | HpyML2ORFQCP | |
| ??? | RM | 207 aa hypothetical protein N201_06030 | HpyML2ORFQBP | |
| ??? | RM | HpyGU71CORFOP (36% identity) | HpyML2ORFQAP | |
| ??? | R | Hpy928ORFRP (97% identity) | GTAC | HpyML2ORFPP |
| ??? | M | M.Hpy39ORFEP (97% identity) | GTAC | M.HpyML2ORFPP |
| ??? | R | type II restriction endonuclease | ACNGT | HpyML2ORFNP |
| ??? | M | M.HpyAR10ORF2290P (99% identity) | ACNGT | M.HpyML2ORFNP |
| ??? | type II adenine specific methyltransferase | |||
| ??? | type II adenine specific methyltransferase | |||
| ??? | M | DNA methyltransferase | ATTAAT | M2.HpyML2ORFOP |
| ??? | M | M.Hpyfe59ORF5575P (99% identity) | CTNAG | M.HpyML2ORFLP |
| ??? | R | Hpy1357ORFDP (98% identity) | CTNAG | HpyML2ORFLP |
| ??? | M | M.Hpyfe38ORF5830P (100% identity) | CCGG | M.HpyML2ORFKP |
| ??? | R | Hpy225ORF281P (90% identity) | CCGG | HpyML2ORFKP |
| ??? | R | R2.HpyK042ORF940P (98% identity) | HpyML2ORFJP | |
| ??? | AAA domain family protein | |||
| ??? | M | M1.HpyTW01ORF900P (98% identity) | M.HpyML2ORFJP | |
| ??? | M | M.HpyMA20III (98% identity) | GATC | M.HpyML2ORFIP |
| ??? | R | HpyV006IXP (97% identity) | GATC | HpyML2ORFIP |
| ??? | R | HpyOK304ORFQP (98% identity) | CCTC | HpyML2ORFHP |
| ??? | DNA methyltransferase | |||
| ??? | M | M2.HpyMA22IXP (98% identity) | CCTC | M2.HpyML2ORFHP |
| ??? | RM | DNA methyltransferase | HpyML2ORFGBP | |
| ??? | RM | HpyK051ORF255P (69% identity) | HpyML2ORFGAP | |
| ??? | M | M.HpyF93ORFEP (91% identity) | M.HpyML2ORFEP | |
| ??? | type II restriction enzyme | |||
| ??? | DNA methyltransferase | |||
| ??? | R | HpyJA101ORF7310P (96% identity) | TGCA | HpyML2ORFFP |
| ??? | M | M.HpyCHN5X (84% identity) | TGCA | M.HpyML2ORFFP |
| ??? | RM | HpyTW04ORF7130P (88% identity) | HpyML2ORFCP | |
| ??? | RM | Hpyfe38ORF270P (97% identity) | HpyML2ORFAP | |
| ??? | S | S1.HpyK111ORF7090P (98% identity) | S1.HpyML2ORFAP | |
| ??? | S | S2.HpyOK212ORFCP (97% identity) | S2.HpyML2ORFAP | |
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | R | Hpy4105ORFSP (95% identity) | HpyML2ORFZP | |
| ??? | M | M.Hpy169ORF6880P (97% identity) | M.HpyML2ORFZP | |
| ??? | M | M.HpyH006ORF7355P (94% identity) | M.HpyML2ORFBP | |
| ??? | R | HpyMA21ORF7455P (97% identity) | HpyML2ORFBP | |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| ??? | 361 aa hypothetical protein | |||
| ??? | R | Hpyfe1GmrSDP (41% identity) | HpyML2GmrDP | |
| ??? | llaJI restriction endonuclease | |||
| ??? | R | R1.HpyMA10ORF1155P (99% identity) | HpyML2McrBP | |
| ??? | 414 aa hypothetical protein | |||