Salmonella enterica subsp. enterica serovar Newport USMARC-1927 |
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Putative Salmonella enterica subsp. enterica serovar Newport USMARC-1927 RM systems
Ref: Harhay,D.M. et al. unpublished
REBASE ref # 21435
Complete sequence: 4,695,514 bp
GenBank #: CP007216
REBASE acronym: Sen1927
Org_num: 15099
All begin AW83_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 48310 | restriction endonuclease | |||
| 6560 | M | M.SenN1543ORF23750P (100% identity) | CCGANNNNNGTC | M.Sen1927ORF6560P |
| 6550 | S | S.Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | S.Sen1927ORF6560P |
| 6540 | R | Sens29927ORF20165P (100% identity) | CCGANNNNNGTC | Sen1927ORF6560P |
| 6530 | DUF91 domain-containing protein | |||
| 6090 | WYL domain-containing protein | |||
| ??? | R | Sen3257ORF23930P (100% identity) | TTACNNNNNTGC | Sen1927IIIP |
| 6070 | M | M.Sens29927ORF20405P (100% identity) | TTACNNNNNTGC | M.Sen1927III |
| 6060 | S | S.Sens29927ORF20405P (100% identity) | TTACNNNNNTGC | S.Sen1927III |
| 6050 | integrase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 41890 | cell division protein DamX | |||
| 41880 | M | adenine-specific DNA-methyltransferase | GATC | M.Sen1927Dam |
| 41870 | ribulose-phosphate 3-epimerase | |||
| 40920 | DUF2556 domain-containing protein | |||
| 40910 | M | adenine-specific DNA-methyltransferase | ATGCAT | M.Sen1927II |
| 40900 | Fis family transcriptional regulator | |||
| 27120 | phosphohydrolase | |||
| 27100 | M | M.Sens29927DcmP (100% identity) | CCWGG | M.Sen1927DcmP |
| 27090 | V | V.StyTDcmP (100% identity) | V.Sen1927DcmP | |
| 27080 | drug/metabolite exporter YedA | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 48005 | 33 aa hypothetical protein | |||
| ??? | R | Sen14981ORF12770P (100% identity) | CAGAG | Sen1927IP |
| 10890 | M | M.Sens29927ORF17960P (100% identity) | CAGAG | M.Sen1927I |
| 10880 | MFS transporter | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6570 | Type I restriction-modification system | |||
| ??? | R | SenN1660Mrr2P (100% identity) | Sen1927MrrP | |
| 6610 | 49 aa hypothetical protein | |||