Yersinia ruckeri SC09 |
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Putative Yersinia ruckeri SC09 RM systems
Ref: Wang,K.Y. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19131
| Sequence length: | GenBank #: | |
| Chromosome: | 3,913,794 bp | JRWX00000000 (NZ_JRWX00000000) |
| Chromosome: | 3,799,871 bp | CP025800 |
| plasmid pWKY: | 73,051 bp | CP025801 |
REBASE acronym: YruSC09
Org_num: 15043
All begin NJ56_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| ??? | M | M.YruSC09ORF11985P (69% identity) | GATC | M.YruSC09ORFAP |
| 17550 | crossover junction endodeoxyribonuclease | |||
| 17570 | 272 aa hypothetical protein | |||
| 17575 | M | M.YruCreekORF9835P (100% identity) | M.YruSC09ORF17575P | |
| 17580 | alpha/beta hydrolase | |||
| 17220 | 221 aa hypothetical protein | |||
| 17225 | M | M.Yru4840ORF17120P (99% identity) | CCNGG | M.YruSC09ORF17225P |
| 17230 | 225 aa hypothetical protein | |||
| 2480 | 696 aa hypothetical protein | |||
| 2485 | R | YruCreekORF1510P (100% identity) | CCWGG | YruSC09ORF2490P |
| 2490 | M | M.YruCreekORF1510P (100% identity) | CCWGG | M.YruSC09ORF2490P |
| 2495 | V | V.Yru163ORF15120P (100% identity) | V.YruSC09ORF2490P | |
| 2500 | type II restriction endonuclease | |||
| 2495 | DNA mismatch repair protein Vsr | |||
| 2500 | R | CspHMR1ORF19248P (49% identity) | CCWGG | YruSC09ORF2500P |
| 2505 | 325 aa hypothetical protein | |||
| 12990 | ribulose-phosphate 3-epimerase | |||
| 12995 | M | M.YruCreekDamP (100% identity) | GATC | M.YruSC09DamP |
| 13000 | 326 aa hypothetical protein | |||
| 10005 | transcriptional regulator | |||
| 10010 | M | M.Yru161ORF6780P (99% identity) | GATC | M.YruSC09ORF10010P |
| 10015 | pseudogene | |||
| Chromosome | ||||
| 3545 | type II restriction endonuclease | |||
| 3550 | V | V.Yru163ORF15120P (100% identity) | V.YruSC09ORF2490P | |
| 3555 | M | M.YruCreekORF1510P (100% identity) | CCWGG | M.YruSC09ORF2490P |
| 3560 | R | YruCreekORF1510P (100% identity) | CCWGG | YruSC09ORF2490P |
| 3565 | RNA helicase | |||
| 7110 | SPOR domain-containing protein | |||
| 7115 | M | M.YruCreekDamP (100% identity) | GATC | M.YruSC09DamP |
| 7120 | ribulose-phosphate 3-epimerase | |||
| 11980 | helix-turn-helix domain-containing protein | |||
| 11985 | M | M.Yru9681ORF11040P (99% identity) | M.YruSC09ORF11985P | |
| 11990 | RusA family crossover junction | |||
| 12010 | antitermination protein | |||
| 12015 | M | M.YruCreekORF9835P (100% identity) | M.YruSC09ORF17575P | |
| 12020 | alpha/beta hydrolase | |||
| 13480 | replication endonuclease | |||
| 13485 | M | M.Yru161ORF6780P (99% identity) | GATC | M.YruSC09ORF10010P |
| 13490 | DUF2732 domain-containing protein | |||
| plasmid pWKY | ||||
| 17860 | 221 aa hypothetical protein | |||
| 17865 | M | M.Yru4840ORF17120P (99% identity) | CCNGG | M.YruSC09ORF17225P |
| 17870 | 225 aa hypothetical protein | |||