Vibrio parahaemolyticus 04.2548 |
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Putative Vibrio parahaemolyticus 04.2548 RM systems
Ref: Banerjee,S. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19077
Contig set: 5,479,562 bp
GenBank #: JTGS00000000 (NZ_JTGS00000000)
REBASE acronym: Vpa2548
Org_num: 15072
All begin PO80_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 19320 | 733 aa hypothetical protein | |||
| 19325 | S | S.Aen12917I (37% identity) | S.Vpa2548ORF19330P | |
| 19330 | M | M.Ple110ORFCP (57% identity) | M.Vpa2548ORF19330P | |
| 19335 | membrane protein | |||
| 13655 | 179 aa hypothetical protein | |||
| 13660 | C | C.VchVC53ORF2495P (92% identity) | C.Vpa2548ORF13660P | |
| 13665 | type II restriction endonuclease | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 840 | 245 aa hypothetical protein | |||
| 845 | M | M.VpaV493ORF1P (100% identity) | CCNGG | M.Vpa2548ORF845P |
| 850 | 165 aa hypothetical protein | |||
| 1575 | ribulose-phosphate 3-epimerase | |||
| 1580 | M | M.VphVPD14DamP (100% identity) | GATC | M.Vpa2548DamP |
| 1585 | cell division protein DamX | |||
| 13660 | XRE family transcriptional regulator | |||
| 13665 | R | AveWP2ORF40210P (88% identity) | ATGCAT | Vpa2548ORF13670P |
| 13670 | M | M.Vninig2ORF4850P (98% identity) | ATGCAT | M.Vpa2548ORF13670P |
| 13675 | 164 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 24110 | integrase | |||
| 24115 | R | PstRORF21650P (95% identity) | Vpa2548ORF24115P | |
| 24120 | DNA methylase N-4 | |||
| 24115 | type III restriction enzyme, res subunit | |||
| 24120 | M | M.AjaJORF13015P (73% identity) | M.Vpa2548ORF24120P | |
| 24125 | 595 aa hypothetical protein, partial | |||