Burkholderia pseudomallei MSHR7343 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Burkholderia pseudomallei MSHR7343 RM systems
Ref: Johnson,S.L. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19046
Contig set: 7,221,696 bp
GenBank #: JQDM00000000 (NZ_JQDM00000000)
REBASE acronym: Bps7343
Org_num: 15009
All begin X962_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4076 | 242 aa hypothetical protein | |||
| 4077 | R | BpssB03ORFEP (100% identity) | CGGANNNNNNNTGG | Bps7343ORF4079P |
| 4078 | S | S.Bps840II (100% identity) | CGGANNNNNNNTGG | S.Bps7343ORF4079P |
| ??? | M | M.BpssB03ORFEP (91% identity) | CGGANNNNNNNTGG | M.Bps7343ORF4079P |
| 4080 | 83 aa hypothetical protein | |||
| 4102 | helix-turn-helix family protein | |||
| 4103 | M | M.Bth34ORF1558P (92% identity) | M.Bps7343ORF4103P | |
| 4104 | S | S.Psp8BORF1062P (48% identity) | S.Bps7343ORF4103P | |
| 4105 | R | Bth34ORF1558P (93% identity) | Bps7343ORF4103P | |
| 4106 | 250 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 6385 | M | M.Bps7334ORF6296P (100% identity) | M.Bps7343ORF6385P | |
| 6386 | immunity 32 family protein | |||
| 6152 | M | M.Bps48ORF5463P (100% identity) | M.Bps7343ORF6152P | |
| 6153 | phage virion morphogenesis protein | |||
| 2854 | M | M.BpscmORF8865P (100% identity) | M.Bps7343ORF2854P | |
| 2855 | transcription activator | |||
| 6115 | bacteriophage replication A family protein | |||
| 6116 | M | M.Bps5608ORF6128P (100% identity) | M.Bps7343ORF6116P | |
| 6117 | 79 aa hypothetical protein | |||
| 3496 | tryptophan synthase, beta subunit | |||
| 3497 | M | M.BspBGKORF4324P (100% identity) | GTWWAC | M.Bps7343ORF3497P |
| 3498 | tryptophan synthase, alpha subunit | |||
| 2006 | 102 aa hypothetical protein | |||
| 2007 | M | M.Bps98ORFIP (100% identity) | M.Bps7343ORF2007P | |
| 2008 | 67 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1733 | gram-negative porin family protein | |||
| 1734 | R | Bps7334ORF951P (100% identity) | CACAG | Bps7343ORF1735P |
| ??? | M | M.BpsW107ORF1669P (100% identity) | CACAG | M.Bps7343ORF1735P |
| 1736 | gram-negative porin family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4073 | SEC-C motif family protein | |||
| 4074 | R | BpssB03McrCP (99% identity) | Bps7343McrC2P | |
| 4075 | R | BpssB03McrBP (99% identity) | Bps7343McrB2P | |
| 4076 | 242 aa hypothetical protein | |||
| 4106 | 250 aa hypothetical protein | |||
| 4107 | R | Bth426McrBP (95% identity) | Bps7343McrBP | |
| 4108 | R | Bth426McrCP (98% identity) | Bps7343McrCP | |
| 4109 | prophage protein | |||