Burkholderia pseudomallei MSHR4012 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Burkholderia pseudomallei MSHR4012 RM systems
Ref: Johnson,S.L. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19046
Contig set: 7,228,783 bp
GenBank #: JPVH00000000 (NZ_JPVH00000000)
REBASE acronym: Bps4012
Org_num: 14991
All begin X985_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 278 | 127 aa hypothetical protein | |||
| 279 | M | M.BpsW30ORF2481P (100% identity) | M.Bps4012ORF279P | |
| 280 | S | S.BpsW30ORF2481P (100% identity) | S.Bps4012ORF279P | |
| 281 | 310 aa hypothetical protein | |||
| 282 | R | BpsW30ORF2481P (100% identity) | Bps4012ORF279P | |
| 283 | 57 aa hypothetical protein | |||
| 1354 | 361 aa hypothetical protein | |||
| 1355 | M | M.Bps4300ORF3040P (100% identity) | M.Bps4012ORF1355P | |
| 1356 | S | S.Bps4300ORF3040P (100% identity) | S.Bps4012ORF1355P | |
| 1357 | R | Bps4300ORF3040P (100% identity) | Bps4012ORF1355P | |
| 1358 | 250 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2944 | tryptophan synthase, alpha subunit | |||
| 2945 | M | M.BpsV44ORF3034P (100% identity) | GTWWAC | M.Bps4012ORF2945P |
| 2946 | tryptophan synthase, beta subunit | |||
| 1241 | phage integrase family protein | |||
| 1242 | M | M.Bps4003ORF1158P (93% identity) | CTGCAG | M.Bps4012ORF1242P |
| 1243 | R | Bps4003ORF1158P (100% identity) | CTGCAG | Bps4012ORF1242P |
| 1244 | replication-relaxation family protein | |||
| 4189 | phage tail protein I | |||
| 4190 | M | M.Bps4372ORF1596P (100% identity) | M.Bps4012ORF4190P | |
| 4191 | TENA/THI-4/PQQC family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1116 | gram-negative porin family protein | |||
| 1117 | R | Bps4003ORF1033P (100% identity) | CACAG | Bps4012ORF1118P |
| ??? | M | M.BpssB03ORFDP (100% identity) | CACAG | M.Bps4012ORF1118P |
| 1119 | gram-negative porin family protein | |||
| 2589 | peptidase S49 family protein | |||
| 2590 | M | M.Bps4003ORF1812AP (100% identity) | M.Bps4012ORF2590AP | |
| 2591 | transposase family protein | |||
| 2592 | integrase core domain protein | |||
| 2593 | M | 205 aa hypothetical protein | M.Bps4012ORF2590BP | |
| 2594 | R | Bps4003ORF1812P (100% identity) | Bps4012ORF2590P | |
| 2595 | phage terminase, small subunit, P27 family | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1358 | 250 aa hypothetical protein | |||
| 1359 | R | Bps4300McrBP (100% identity) | Bps4012McrBP | |
| 1360 | R | Bps4300McrCP (100% identity) | Bps4012McrCP | |
| 1361 | subtilase family protein | |||