Burkholderia pseudomallei MSHR4003 |
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Putative Burkholderia pseudomallei MSHR4003 RM systems
Ref: Johnson,S.L. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19046
Contig set: 7,244,536 bp
GenBank #: JPUZ00000000 (NZ_JPUZ00000000)
REBASE acronym: Bps4003
Org_num: 14985
All begin X983_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 194 | 127 aa hypothetical protein | |||
| 195 | M | M.BpsW30ORF2481P (100% identity) | M.Bps4003ORF195P | |
| 196 | S | S.BpsW30ORF2481P (100% identity) | S.Bps4003ORF195P | |
| 197 | 310 aa hypothetical protein | |||
| 198 | R | BpsW30ORF2481P (100% identity) | Bps4003ORF195P | |
| 199 | phage integrase/recombinase protein | |||
| 1270 | helix-turn-helix family protein | |||
| 1271 | M | M.Bps4300ORF3040P (100% identity) | M.Bps4003ORF1271P | |
| 1272 | S | S.Bps4300ORF3040P (100% identity) | S.Bps4003ORF1271P | |
| 1273 | R | Bps4300ORF3040P (100% identity) | Bps4003ORF1271P | |
| 1274 | 250 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 5823 | tryptophan synthase, beta subunit | |||
| 5824 | M | M.BpsV44ORF3034P (100% identity) | GTWWAC | M.Bps4003ORF5824P |
| 5825 | tryptophan synthase, alpha subunit | |||
| 1157 | phage integrase family protein | |||
| 1158 | M | M.Bps4012ORF1242P (93% identity) | CTGCAG | M.Bps4003ORF1158P |
| 1159 | R | Bps4012ORF1242P (100% identity) | CTGCAG | Bps4003ORF1158P |
| 1160 | replication-relaxation family protein | |||
| 1442 | phage tail protein I | |||
| 1443 | M | M.Bps4372ORF1596P (100% identity) | M.Bps4003ORF1443P | |
| 1444 | transcription activator | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1031 | gram-negative porin family protein | |||
| 1032 | R | Bps4012ORF1118P (100% identity) | CACAG | Bps4003ORF1033P |
| ??? | M | M.BpssB03ORFDP (100% identity) | CACAG | M.Bps4003ORF1033P |
| 1034 | gram-negative porin family protein | |||
| 1810 | phage terminase, small subunit, P27 family | |||
| 1811 | R | Bps4012ORF2590P (100% identity) | Bps4003ORF1812P | |
| 1812 | M | 205 aa hypothetical protein | M.Bps4003ORF1812BP | |
| 1813 | integrase core domain protein | |||
| 1814 | transposase family protein | |||
| 1815 | M | M.Bps4012ORF2590AP (100% identity) | M.Bps4003ORF1812AP | |
| 1816 | peptidase S49 family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1274 | 250 aa hypothetical protein | |||
| 1275 | R | Bps4300McrBP (100% identity) | Bps4003McrBP | |
| 1276 | R | Bps4300McrCP (100% identity) | Bps4003McrCP | |
| 1277 | subtilase family protein | |||