Burkholderia pseudomallei MSHR4000 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Burkholderia pseudomallei MSHR4000 RM systems
Ref: Johnson,S.L. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19046
Contig set: 7,462,284 bp
GenBank #: JPVL00000000 (NZ_JPVL00000000)
REBASE acronym: Bps4000
Org_num: 14995
All begin X980_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4304 | tryptophan synthase, alpha subunit | |||
| 4305 | M | M.BpsR456ORF4944P (100% identity) | M.Bps4000ORF4305P | |
| 4306 | tryptophan synthase, beta subunit | |||
| 5597 | phage integrase family protein | |||
| 5598 | R | BpsV5ORF5470P (100% identity) | GTCGAC | Bps4000ORF5599P |
| 5599 | M | M.BpsV5ORF5470P (100% identity) | GTCGAC | M.Bps4000ORF5599P |
| ??? | C | C.BpsMSORFAP (100% identity) | C.Bps4000ORF5599P | |
| 5600 | transposase family protein | |||
| 5601 | integrase core domain protein | |||
| ??? | V | V.BpsMSORFAP (100% identity) | V.Bps4000ORF5599P | |
| 5602 | integrase core domain protein | |||
| 5867 | phage tail protein I | |||
| 5868 | M | M.Bps3997ORF1999P (100% identity) | M.Bps4000ORF5868P | |
| 5869 | transcription activator | |||
| 837 | bacteriophage lysis protein | |||
| 838 | M | M.BthM20ORF1883P (99% identity) | M.Bps4000ORF838P | |
| 839 | immunity 32 family protein | |||
| 1341 | 79 aa hypothetical protein | |||
| ??? | M | M.Bth59ORF2189P (100% identity) | M.Bps4000ORF1342P | |
| 1343 | bacteriophage replication A family protein | |||
| 1363 | 167 aa hypothetical protein | |||
| 1364 | M | M.BtlORF1338P (89% identity) | M.Bps4000ORF1364P | |
| 1365 | phage baseplate assembly V family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1984 | gram-negative porin family protein | |||
| 1985 | M | M.Bsp202ORF2625P (100% identity) | CACAG | M.Bps4000ORF1985P |
| 1986 | R | Bps3965ORF2409P (100% identity) | CACAG | Bps4000ORF1985P |
| 1987 | gram-negative porin family protein | |||