Xylella fastidiosa CoDiRO |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xylella fastidiosa CoDiRO RM systems
Ref: Giampetruzzi,A. et al. Genome Announc 3 (1) (2015)
REBASE ref # 19038
GenBank #: JUJW00000000
REBASE acronym: XfaCDR
Org_num: 14953
All begin RA12_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 10915 | 85 aa hypothetical protein | |||
| 10920 | R | XfaS2ORF10940P (100% identity) | XfaCDRORF10930P | |
| 10925 | S | S.XfaS2ORF10940P (100% identity) | S.XfaCDRORF10930P | |
| 10930 | M | M.XfaS2ORF10940P (85% identity) | M.XfaCDRORF10930P | |
| 10935 | 233 aa hypothetical protein | |||
| 10935 | 233 aa hypothetical protein | |||
| 10940 | R | XfaS2ORF10965P (100% identity) | XfaCDRORF10955P | |
| 10945 | S | S.XfaS2ORF10965P (81% identity) | S.XfaCDRORF10955P | |
| 10950 | pseudogene | |||
| 10955 | M | M.XfaS2ORF10965P (100% identity) | M.XfaCDRORF10955P | |
| 10960 | 65 aa hypothetical protein | |||
| 11000 | 69 aa hypothetical protein | |||
| 11005 | R | XfaS2ORF11025P (100% identity) | XfaCDRORF11015P | |
| 11010 | S | S.XfaS2ORF11025P (100% identity) | S.XfaCDRORF11015P | |
| 11015 | M | M.XfaS2ORF11025P (100% identity) | M.XfaCDRORF11015P | |
| 11020 | 84 aa hypothetical protein | |||
| 1265 | 170 aa hypothetical protein | |||
| ??? | R | hypothetical protein | XfaCDRORF1290P | |
| 1280 | pseudogene | |||
| 1285 | S | S.XfaS2ORF1265P (100% identity) | S.XfaCDRORF1290P | |
| ??? | M | M.XfaS2ORF1265P (100% identity) | M.XfaCDRORF1290P | |
| 1305 | 68 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 7915 | 190 aa hypothetical protein | |||
| 7920 | M | M.XfaS2ORF5765P (100% identity) | GCATGC | M.XfaCDRORF7920P |
| 7925 | pseudogene | |||
| 10080 | 470 aa hypothetical protein | |||
| 10085 | M | M.XfaS2ORF3285P (100% identity) | M.XfaCDRORF10085P | |
| 10090 | phosphotyrosine protein phosphatase | |||
| 10140 | 79 aa hypothetical protein B375_03725 | |||
| 10145 | M | M.XfaS2ORF3220P (100% identity) | M.XfaCDRORF10145P | |
| 10150 | peptidase | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 8540 | alpha/beta hydrolase | |||
| 8545 | R | XfaS2ORF4555P (100% identity) | XfaCDRORF8550P | |
| 8550 | M | M.XfaS2ORF4555P (100% identity) | M.XfaCDRORF8550P | |
| 8555 | 3-oxoacyl-ACP synthase | |||