Escherichia coli 5-366-08_S1_C3 |
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Putative Escherichia coli 5-366-08_S1_C3 RM systems
Ref: Silbergeld,E. et al. unpublished
REBASE ref # 19165
Contig set: 5,440,914 bp
GenBank #: JONE00000000 (NZ_JONE00000000)
REBASE acronym: EcoS1C3
Org_num: 14929
All begin AB67_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4991 | TIR domain protein | |||
| ??? | M | M1.EcoS1C1ORF257P (100% identity) | M1.EcoS1C3ORF4992P | |
| ??? | M | M2.EcoS1C1ORF257P (100% identity) | M2.EcoS1C3ORF4992P | |
| 4994 | S | S.EcoS1C1ORF257P (100% identity) | S.EcoS1C3ORF4992P | |
| 4995 | R | EcoS1C1ORF257P (100% identity) | EcoS1C3ORF4992P | |
| 4996 | type I restriction modification DNA specificity | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 348 | 44 aa hypothetical protein | |||
| 349 | M | M.EcoS1C1ORF5100P (100% identity) | GATC | M.EcoS1C3ORF349P |
| 350 | lexA DNA binding domain protein | |||
| 277 | flagellar biosynthesis anti-sigma factor FlgM | |||
| 278 | R | EcoS1C1ORF928P (100% identity) | CCWGG | EcoS1C3ORF279P |
| 279 | M | M.Ecoi362ORF3506P (100% identity) | CCWGG | M.EcoS1C3ORF279P |
| 280 | flagella basal body P-ring formation protein | |||
| 3891 | ribulose-phosphate 3-epimerase | |||
| 3892 | M | M.SspPIBDamP (100% identity) | GATC | M.EcoS1C3DamP |
| 3893 | protein damX | |||
| 5284 | 73 aa hypothetical protein | |||
| 5285 | M | M.EcoS1C1ORF5413P (99% identity) | M.EcoS1C3ORF5285P | |
| 5286 | 41 aa hypothetical protein | |||
| 2198 | 306 aa hypothetical protein | |||
| ??? | V | V.EcoS1C1DcmP (100% identity) | V.EcoS1C3DcmP | |
| 2200 | M | M.EcoSN137DcmP (100% identity) | CCWGG | M.EcoS1C3DcmP |
| 2201 | 231 aa hypothetical protein | |||
| 2890 | prophage CP4-57 regulatory family protein | |||
| 2891 | M | M.EcoS1C1ORF1934P (99% identity) | GATC | M.EcoS1C3ORF2891P |
| 2892 | 64 aa hypothetical protein | |||
| 3752 | DNA-binding protein fis | |||
| 3753 | M | M.EcosS1ORF18905P (99% identity) | ATGCAT | M.EcoS1C3ORF3753P |
| 3754 | 37 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1310 | 142 aa hypothetical protein | |||
| 1311 | R | EcoSW4848GmrSD2P (99% identity) | EcoS1C3GmrSDP | |
| 1312 | 78 aa hypothetical protein | |||