Escherichia coli UMEA 3108-1 |
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Putative Escherichia coli UMEA 3108-1 RM systems
Ref: Feldgarden,M. et al. unpublished
REBASE ref # 19159
Contig set: 5,053,548 bp
GenBank #: AWBD00000000 (NZ_AWBD00000000)
REBASE acronym: Eco3108
Org_num: 14899
All begin G908_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4253 | 75 aa hypothetical protein | |||
| 4254 | M | M1.EcoP881ORF11035P (100% identity) | M1.Eco3108ORF4254P | |
| 4255 | M | M2.EcoP881ORF11035P (100% identity) | M2.Eco3108ORF4254P | |
| 4256 | S | S.EcoP881ORF11035P (100% identity) | S.Eco3108ORF4254P | |
| 4257 | R | EcoP881ORF11035P (99% identity) | Eco3108ORF4254P | |
| 4258 | 635 aa hypothetical protein | |||
| 4306 | 237 aa hypothetical protein | |||
| 4307 | R | EcoP881ORF10770P (100% identity) | Eco3108ORF4309P | |
| 4308 | S | S.EcoP881ORF10770P (100% identity) | S.Eco3108ORF4309P | |
| 4309 | M | M.EcoZ247ORF19790P (100% identity) | M.Eco3108ORF4309P | |
| 4310 | 699 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4492 | M | adenine-specific DNA-methyltransferase | M.Eco3108ORF4492P | |
| 4493 | 73 aa hypothetical protein | |||
| 4802 | 73 aa hypothetical protein | |||
| 4803 | M | 134 aa hypothetical protein | M.Eco3108ORF4803P | |
| 3457 | ribulose-phosphate 3-epimerase | |||
| 3458 | M | M.Ecos69DamP (100% identity) | GATC | M.Eco3108DamP |
| 3459 | protein damX | |||
| 227 | flagella basal body P-ring formation protein | |||
| 228 | M | M.EcoS7438ORFEP (100% identity) | CCWGG | M.Eco3108ORF228P |
| 229 | R | EcoSC455ORFAP (100% identity) | CCWGG | Eco3108ORF228P |
| 230 | flagellar biosynthesis anti-sigma factor FlgM | |||
| 1395 | phage protein | |||
| 1396 | M | M.EcoG178ORF19425P (93% identity) | M.Eco3108ORF1396P | |
| 1397 | 70 aa hypothetical protein | |||
| 1994 | blue pigment (indigoidine) exporter | |||
| 1995 | V | V.SflC32DcmP (74% identity) | V.Eco3108DcmP | |
| 1996 | M | M.SflC32DcmP (99% identity) | CCWGG | M.Eco3108DcmP |
| 1997 | phosphohydrolase | |||
| 3341 | DNA-binding protein fis | |||
| 3342 | M | M.Sdy12039ORFBP (100% identity) | ATGCAT | M.Eco3108ORF3342P |
| 3343 | membrane protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4309 | 781 aa hypothetical protein | |||
| 4310 | R | EcoP881GmrSDP (100% identity) | Eco3108GmrSDP | |
| 4311 | 244 aa hypothetical protein | |||