Escherichia coli 4_1_47FAA |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli 4_1_47FAA RM systems
Ref: Earl,A. et al. unpublished
REBASE ref # 13805
Contig set: 5,256,230 bp
GenBank #: ACTQ00000000 (NZ_ACTQ00000000)
REBASE acronym: Eco4147
Org_num: 14896
All begin HMPREF0986_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 676 | 304 aa hypothetical protein | |||
| 677 | R | SspPIBORF19375P (100% identity) | Eco4147ORF680P | |
| 678 | S | S.SspPIBORF19375P (54% identity) | S1.Eco4147ORF680P | |
| 679 | S | S.SspPIBORF19375P (44% identity) | S2.Eco4147ORF680P | |
| 680 | M | M2.SspPIBORF19375P (100% identity) | M2.Eco4147ORF680P | |
| 681 | M | M1.SspPIBORF19375P (99% identity) | M1.Eco4147ORF680P | |
| 682 | 120 aa hypothetical protein | |||
| 631 | 699 aa hypothetical protein | |||
| 632 | M | M.Ecos135ORF4680P (100% identity) | M.Eco4147ORF632P | |
| 633 | S | S.Ecos135ORF4680P (69% identity) | S1.Eco4147ORF632P | |
| 634 | S | S.EcoSCU318ORF355P (26% identity) | S2.Eco4147ORF632P | |
| 635 | R | EcoSCB15ORF17760P (100% identity) | Eco4147ORF632P | |
| 636 | 220 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2870 | 108 aa hypothetical protein | |||
| 2871 | M | M.Ecos135ORF19235P (100% identity) | GATC | M.Eco4147ORF2871P |
| 2872 | 164 aa hypothetical protein | |||
| 577 | 108 aa hypothetical protein | |||
| 578 | M | M.Sso7924ORF2966P (100% identity) | GATC | M.Eco4147ORF578P |
| 579 | 164 aa hypothetical protein | |||
| 686 | 125 aa hypothetical protein | |||
| 687 | R | SspPIBORF19405P (100% identity) | Eco4147ORF687P | |
| 688 | 37 aa hypothetical protein | |||
| 4812 | 308 aa hypothetical protein | |||
| 4813 | M | M.UbapRSB107ORFAP (100% identity) | M.Eco4147ORF4813P | |
| 4814 | 73 aa hypothetical protein | |||
| 3224 | ribulose-phosphate 3-epimerase | |||
| 3225 | M | M.Fnu048ORFTP (100% identity) | GATC | M.Eco4147DamP |
| 3226 | protein damX | |||
| 4494 | 73 aa hypothetical protein | |||
| 4495 | M | M.SflN92ORF24820P (100% identity) | M.Eco4147ORF4495P | |
| 4496 | 145 aa hypothetical protein | |||
| 3630 | 231 aa hypothetical protein | |||
| 3631 | M | M.Fnu048DcmP (100% identity) | CCWGG | M.Eco4147DcmP |
| 3632 | V | V.Fnu048DcmP (100% identity) | V.Eco4147DcmP | |
| 3633 | carboxylate/Amino Acid/Amine transporter | |||
| 2241 | DNA-binding protein fis | |||
| 2242 | M | M.Fnu048ORFDP (100% identity) | ATGCAT | M.Eco4147ORF2242P |
| 2243 | 59 aa hypothetical protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 682 | 120 aa hypothetical protein | |||
| 683 | R | Efe5MrrP (93% identity) | Eco4147MrrP | |
| 684 | 518 aa hypothetical protein | |||