Vibrio cholerae HC-02A1 |
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Putative Vibrio cholerae HC-02A1 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 13965
Contig set: 3,947,804 bp
GenBank #: AFOT00000000 (NZ_AFOT00000000)
REBASE acronym: Vch02A1
Org_num: 14883
All begin VCHC02A1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6 | transcriptional regulator | |||
| 7 | M | M1.Vsp811ORF18745P (100% identity) | M1.Vch02A1ORF7P | |
| 8 | 209 aa hypothetical protein | |||
| 9 | divergent AAA domain protein | |||
| 10 | M | M2.VchHC1A2ORF14P (100% identity) | M2.Vch02A1ORF7P | |
| 11 | S | S.VchHC1A2ORF14P (100% identity) | S.Vch02A1ORF7P | |
| 12 | R | VchHC1A2ORF14P (100% identity) | Vch02A1ORF7P | |
| 13 | DNA-binding protein | |||
| 2940 | prophage DNA-binding domain protein | |||
| 2941 | S | S.Vch61A2ORF3583P (100% identity) | S.Vch02A1ORF2942P | |
| 2942 | M | M.VchHC1A2ORF3625P (100% identity) | M.Vch02A1ORF2942P | |
| 2943 | R | R1.VchHC1A2ORF3625P (100% identity) | Vch02A1ORF2942P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2770 | ribulose-phosphate 3-epimerase | |||
| 2771 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch02A1DamP |
| 2772 | sporulation related domain protein | |||
| 3628 | integrase | |||
| 3629 | M | M.VchHC1A2ORF827P (100% identity) | M.Vch02A1ORF3629P | |
| 3630 | R | VchHC1A2ORF827P (100% identity) | Vch02A1ORF3629P | |
| 701 | 1229 aa hypothetical protein | |||
| 702 | RM | VchHC1A2ORF1592P (100% identity) | Vch02A1ORF702P | |
| 703 | pglZ domain protein | |||