Vibrio cholerae HC-56A1 |
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Putative Vibrio cholerae HC-56A1 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 15482
Contig set: 3,928,043 bp
GenBank #: ALDW00000000 (NZ_ALDW00000000)
REBASE acronym: Vch56A1
Org_num: 14869
All begin VCHC56A1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3 | transcriptional regulator | |||
| 4 | M | M1.Vsp811ORF18745P (100% identity) | M1.Vch56A1ORF4P | |
| 5 | 209 aa hypothetical protein | |||
| 6 | divergent AAA domain protein | |||
| 7 | M | M2.VchHC1A2ORF14P (100% identity) | M2.Vch56A1ORF4P | |
| 8 | S | S.VchHC1A2ORF14P (100% identity) | S.Vch56A1ORF4P | |
| 9 | R | VchHC1A2ORF14P (100% identity) | Vch56A1ORF4P | |
| 10 | DNA-binding protein | |||
| 3037 | prophage DNA-binding domain protein | |||
| 3038 | S | S.Vch78A1ORF12P (100% identity) | S.Vch56A1ORF3039P | |
| 3039 | M | M.VchHC1A2ORF3625P (100% identity) | M.Vch56A1ORF3039P | |
| 3040 | R | Vch78A1ORF12P (100% identity) | Vch56A1ORF3039P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2870 | ribulose-phosphate 3-epimerase | |||
| 2871 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch56A1DamP |
| 2872 | sporulation related domain protein | |||
| 3642 | integrase | |||
| 3643 | M | M.VchHC1A2ORF827P (95% identity) | M.Vch56A1ORF3643P | |
| 3644 | R | VchHC1A2ORF827P (100% identity) | Vch56A1ORF3643P | |
| 3645 | transposase | |||
| 795 | 1229 aa hypothetical protein | |||
| 796 | RM | VchHC1A2ORF1592P (100% identity) | Vch56A1ORF796P | |
| 797 | pglZ domain protein | |||