Vibrio cholerae HC-55B2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Vibrio cholerae HC-55B2 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 13965
Contig set: 3,937,890 bp
GenBank #: AJSM00000000 (NZ_AJSM00000000)
REBASE acronym: Vch55B2
Org_num: 14864
All begin VCHC55B2_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 7 | transcriptional regulator | |||
| 8 | M | M1.Vsp811ORF18745P (100% identity) | M1.Vch55B2ORF8P | |
| 9 | 209 aa hypothetical protein | |||
| 10 | divergent AAA domain protein | |||
| 11 | M | M2.VchHC1A2ORF14P (100% identity) | M2.Vch55B2ORF8P | |
| 12 | S | S.VchHC1A2ORF14P (100% identity) | S.Vch55B2ORF8P | |
| 13 | R | VchHC1A2ORF14P (100% identity) | Vch55B2ORF8P | |
| 14 | DNA-binding protein | |||
| 3138 | prophage DNA-binding domain protein | |||
| 3139 | S | S.Vch61A2ORF3583P (100% identity) | S.Vch55B2ORF3140P | |
| 3140 | M | M.VchHC1A2ORF3625P (100% identity) | M.Vch55B2ORF3140P | |
| 3141 | R | R1.VchHC1A2ORF3625P (100% identity) | Vch55B2ORF3140P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2970 | ribulose-phosphate 3-epimerase | |||
| 2971 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch55B2DamP |
| 2972 | sporulation related domain protein | |||
| 3634 | phage integrase | |||
| 3635 | M | M.VchHC1A2ORF827P (100% identity) | M.Vch55B2ORF3635P | |
| 3636 | R | VchHC1A2ORF827P (100% identity) | Vch55B2ORF3635P | |
| 706 | 1229 aa hypothetical protein | |||
| 707 | RM | VchHC1A2ORF1592P (100% identity) | Vch55B2ORF707P | |
| 708 | pglZ domain protein | |||