Vibrio cholerae HC-50A1 |
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Putative Vibrio cholerae HC-50A1 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 13965
Contig set: 3,929,723 bp
GenBank #: ALDS00000000 (NZ_ALDS00000000)
REBASE acronym: Vch50A1
Org_num: 14866
All begin VCHC50A1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 6 | transcriptional regulator | |||
| 7 | M | M1.Vsp811ORF18745P (100% identity) | M1.Vch50A1ORF7P | |
| 8 | 209 aa hypothetical protein | |||
| 9 | divergent AAA domain protein | |||
| 10 | M | M2.VchHC1A2ORF14P (100% identity) | M2.Vch50A1ORF7P | |
| 11 | S | S.VchHC1A2ORF14P (100% identity) | S.Vch50A1ORF7P | |
| 12 | R | VchHC1A2ORF14P (100% identity) | Vch50A1ORF7P | |
| 13 | DNA-binding protein | |||
| 2974 | prophage DNA-binding domain protein | |||
| 2975 | S | S.Vch78A1ORF12P (100% identity) | S.Vch50A1ORF2976P | |
| 2976 | M | M.VchHC1A2ORF3625P (100% identity) | M.Vch50A1ORF2976P | |
| 2977 | R | R1.VchHC1A2ORF3625P (100% identity) | Vch50A1ORF2976P | |
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2801 | ribulose-phosphate 3-epimerase | |||
| 2802 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch50A1DamP |
| 2803 | sporulation related domain protein | |||
| 3672 | integrase | |||
| 3673 | M | M.VchHC1A2ORF827P (100% identity) | M.Vch50A1ORF3673P | |
| 3674 | R | VchHC1A2ORF827P (100% identity) | Vch50A1ORF3673P | |
| 3675 | transposase | |||
| 705 | 1229 aa hypothetical protein | |||
| 706 | RM | VchHC1A2ORF1592P (100% identity) | Vch50A1ORF706P | |
| 707 | pglZ domain protein | |||