Vibrio cholerae HC-36A1 |
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Putative Vibrio cholerae HC-36A1 RM systems
Ref: Eppinger,M. et al. unpublished
REBASE ref # 15482
Contig set: 3,959,428 bp
GenBank #: AXDR00000000 (NZ_AXDR00000000)
REBASE acronym: Vch36A1
Org_num: 14872
All begin VCHC36A1_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 32 | type I restriction modification DNA specificity | |||
| 33 | M | M.VchHC1A2ORF3625P (100% identity) | M.Vch36A1ORF33P | |
| 34 | R | Vch78A1ORF12P (100% identity) | Vch36A1ORF33P | |
| 35 | transposase DDE domain protein | |||
| 76 | transcriptional regulator | |||
| 77 | M | M1.Vsp811ORF18745P (100% identity) | M1.Vch36A1ORF77P | |
| 78 | 209 aa hypothetical protein | |||
| 79 | divergent AAA domain protein | |||
| 80 | M | M2.VchHC1A2ORF14P (100% identity) | M2.Vch36A1ORF77P | |
| 81 | S | S.VchHC1A2ORF14P (100% identity) | S.Vch36A1ORF77P | |
| 82 | R | VchHC1A2ORF14P (100% identity) | Vch36A1ORF77P | |
| 83 | DNA-binding protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3559 | ribulose-phosphate 3-epimerase | |||
| 3560 | M | M.VspNIH41DamP (100% identity) | GATC | M.Vch36A1DamP |
| 3561 | sporulation related domain protein | |||
| 837 | 1229 aa hypothetical protein | |||
| 838 | RM | VchHC1A2ORF1592P (100% identity) | Vch36A1ORF838P | |
| 839 | pglZ domain protein | |||
| 2438 | transposase DDE domain protein | |||
| 2439 | R | VchHC1A2ORF827P (100% identity) | Vch36A1ORF2440P | |
| 2440 | M | M.VchHC1A2ORF827P (95% identity) | M.Vch36A1ORF2440P | |
| 2441 | integrase | |||