Escherichia coli G1/2 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Escherichia coli G1/2 RM systems
Ref: Zschuettig,A. et al. unpublished
REBASE ref # 19319
GenBank #: JPKH00000000
REBASE acronym: Eco16441
Org_num: 15234
All begin EL75_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 4615 | 251 aa hypothetical protein | |||
| 4616 | R | EcoG8ORF10120P (100% identity) | Eco16441ORF4620P | |
| 4617 | 594 aa hypothetical protein | |||
| 4618 | protein yecA | |||
| 4619 | S | S.EcoG8ORF10120P (100% identity) | S.Eco16441ORF4620P | |
| 4620 | M | M.EcoG8ORF10120P (100% identity) | M.Eco16441ORF4620P | |
| 4621 | 232 aa hypothetical protein | |||
| ??? | pseudogene | |||
| 3773 | M | M.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | M.Eco16441ORF3773P |
| 3774 | S | S.SflSTLE3ORF19325P (100% identity) | AGCANNNNNNTGA | S.Eco16441ORF3773P |
| ??? | R | EcoS88ORF4968P (100% identity) | AGCANNNNNNTGA | Eco16441ORF3773P |
| 3776 | endoribonuclease SymE | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4973 | 48 aa hypothetical protein | |||
| 4974 | M | M.EcoLR03ORF33110P (100% identity) | M.Eco16441ORF4974P | |
| 4975 | pseudogene | |||
| 4738 | 46 aa hypothetical protein | |||
| 4739 | S | S.EcoG12ORF7085P (98% identity) | S.Eco16441ORF4740P | |
| 4740 | RM | EcoSO40ORF8270P (87% identity) | Eco16441ORF4740P | |
| 4607 | 65 aa hypothetical protein | |||
| 4608 | M | M.EcoSCU483ORF18945P (56% identity) | M.Eco16441ORF4608P | |
| 1663 | protein yedJ | |||
| 1664 | M | M.Ecos53DcmP (100% identity) | CCWGG | M.Eco16441DcmP |
| 1665 | V | V.EcostT2DcmP (100% identity) | V.Eco16441DcmP | |
| 1666 | transmembrane subunit | |||
| 309 | Protein DamX | |||
| 310 | M | DNA adenine methylase | GATC | M.Eco16441DamP |
| 311 | Ribulose-phosphate 3-epimerase | |||
| 425 | protein YhdU | |||
| 426 | M | M.SflSTLE4ORF2240P (100% identity) | ATGCAT | M.Eco16441ORF426P |
| 427 | DNA-binding protein Fis | |||
| 1281 | 64 aa hypothetical protein | |||
| 1282 | M | Transcriptional activator, adenine-specific DNA | GATC | M.Eco16441ORF1282P |
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 4716 | R | Eco16448McrBP (100% identity) | Eco16441McrBP | |
| 4717 | R | EcoG8McrCP (100% identity) | Eco16441McrCP | |
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1776 | protein yfdN | |||
| 1777 | M | M.EcoG8ORF8555P (100% identity) | GATC | M.Eco16441ORF1777P |
| 1778 | LexA repressor | |||
| 2858 | 75 aa hypothetical protein | |||
| 2859 | M | M.EcoG8ORF16525P (100% identity) | GATC | M.Eco16441ORF2859P |
| 2860 | 78 aa hypothetical protein | |||