Yersinia intermedia Y228 |
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Putative Yersinia intermedia Y228 RM systems
Ref: Daligault,H.E. et al. unpublished
REBASE ref # 18983
Complete sequence: 4,859,749 bp
GenBank #: CP009801
REBASE acronym: YinY228
Org_num: 14785
All begin CH53_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1539 | ribulose-phosphate 3-epimerase | |||
| 1540 | M | M.Ysp228DamP (100% identity) | GATC | M.YinY228DamP |
| 1541 | sporulation related domain protein | |||
| 3501 | phage integrase family protein | |||
| 3502 | R | PacGXPa1ORF17340P (95% identity) | CTGCAG | YinY228IP |
| 3503 | M | M.PveECC15ORF9440P (93% identity) | CTGCAG | M.YinY228I |
| 3504 | phage integrase | |||
| 3635 | bacterial regulatory s, gntR family protein | |||
| 3636 | M | M.Yma8026ORF16170P (88% identity) | GATC | M.YinY228ORF3636P |
| 3637 | phage antitermination Q family protein | |||
| 4223 | 72 aa hypothetical protein | |||
| 4224 | M | M.YenY201ORF17440P (96% identity) | GATC | M.YinY228ORF4224P |
| 4225 | membrane protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1230 | 437 aa hypothetical protein | |||
| 1231 | R | Yen2ORF3588P (100% identity) | CCGAG | YinY228IIP |
| 1232 | M | M.Yen2ORF3588P (100% identity) | CCGAG | M.YinY228II |
| 1233 | phage integrase family protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3010 | RHS Repeat family protein | |||
| 3011 | R | Rpl52256McrC2P (91% identity) | YinY228McrCP | |
| 3012 | R | PcyNE1McrBP (89% identity) | YinY228McrBP | |
| 3013 | 308 aa hypothetical protein | |||