Yersinia pseudotuberculosis 1 |
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Putative Yersinia pseudotuberculosis 1 RM systems
Ref: Johnson,S.L. et al. unpublished
REBASE ref # 19725
Complete sequence: 4,728,337 bp
GenBank #: CP009786
REBASE acronym: Yps1
Org_num: 14783
All begin BZ23_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 14 | 40 aa hypothetical protein | |||
| 15 | R | YpsM89ORF3460P (100% identity) | CRTANNNNNNNTGAR | Yps1IIP |
| 16 | S | S.YpsM89ORF3460P (100% identity) | CRTANNNNNNNTGAR | S.Yps1II |
| 17 | M | M.YpsM89ORF3460P (100% identity) | CRTANNNNNNNTGAR | M.Yps1II |
| 18 | peptidase M48 family protein | |||
| 3509 | 240 aa hypothetical protein | |||
| 3510 | R | YpsST42ORFAP (100% identity) | TGACNNNNNCTC | Yps1IP |
| 3511 | virulence RhuM family protein | |||
| 3512 | S | S1.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | S.Yps1I |
| 3513 | M | M.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | M.Yps1I |
| 3514 | type I restriction modification DNA specificity | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 334 | exonuclease family protein | |||
| 335 | M | M.YpsMD67ORF59P (100% identity) | GATC | M.Yps1ORF335P |
| 336 | bacteriophage replication protein | |||
| 683 | 77 aa hypothetical protein | |||
| 684 | M | M.Ysi228ORF14325P (98% identity) | GATC | M.Yps1ORF684P |
| 685 | 38 aa hypothetical protein | |||
| 688 | phage antitermination Q family protein | |||
| 689 | M | M.Yps6904ORF1333P (79% identity) | M.Yps1ORF689P | |
| 690 | 143 aa hypothetical protein | |||
| 1409 | C-5 cytosine-specific DNA methylase domain | |||
| 1410 | M | M.YpsM89ORF15220P (100% identity) | GATC | M.Yps1ORF1410P |
| 1411 | exonuclease family protein | |||
| 3366 | ribulose-phosphate 3-epimerase | |||
| 3367 | M | M.Ysi228DamP (100% identity) | GATC | M.Yps1DamP |
| 3368 | sporulation related domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3507 | transposase IS200 like family protein | |||
| 3508 | R | YpsYpse1MrrP (100% identity) | Yps1MrrP | |
| 3509 | 240 aa hypothetical protein | |||