Yersinia pseudotuberculosis MD67 |
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Putative Yersinia pseudotuberculosis MD67 RM systems
Ref: Bishop-Lilly,K.A. et al. unpublished
REBASE ref # 18070
Complete sequence: 4,729,753 bp
GenBank #: CP009757
REBASE acronym: YpsMD67
Org_num: 14777
All begin BZ21_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3235 | 240 aa hypothetical protein | |||
| 3236 | R | YpsST42ORFAP (100% identity) | TGACNNNNNCTC | YpsMD67IIP |
| 3237 | virulence RhuM family protein | |||
| 3238 | S | S1.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | S.YpsMD67II |
| 3239 | M | M.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | M.YpsMD67II |
| 3240 | type I restriction modification DNA specificity | |||
| 3914 | 40 aa hypothetical protein | |||
| 3915 | R | YpsST42ORFCP (100% identity) | CYGANNNNNNCTG | YpsMD67IP |
| 3916 | S | S.YpsST42ORFCP (100% identity) | CYGANNNNNNCTG | S.YpsMD67I |
| 3917 | M | M.YpsM207ORF15P (100% identity) | CYGANNNNNNCTG | M.YpsMD67I |
| 3918 | peptidase M48 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 58 | exonuclease family protein | |||
| 59 | M | M.YpsM89ORF11345P (100% identity) | GATC | M.YpsMD67ORF59P |
| 60 | bacteriophage replication protein | |||
| 757 | 168 aa hypothetical protein | |||
| 758 | M | M.YenNW67ORF10925P (87% identity) | M.YpsMD67ORF758P | |
| 759 | 115 aa hypothetical protein | |||
| 3079 | ribulose-phosphate 3-epimerase | |||
| 3080 | M | M.Ysi228DamP (100% identity) | GATC | M.YpsMD67DamP |
| 3081 | sporulation related domain protein | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 3233 | helix-turn-helix family protein | |||
| 3234 | R | YpsYpse1MrrP (100% identity) | YpsMD67MrrP | |
| 3235 | 240 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1127 | C-5 cytosine-specific DNA methylase domain | |||
| 1128 | M | M.YpsM207ORF15505P (100% identity) | GATC | M.YpsMD67ORF1128P |
| 1129 | exonuclease family protein | |||