Yersinia pseudotuberculosis IP 32953 IP32953 |
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Putative Yersinia pseudotuberculosis IP 32953 IP32953 RM systems
Ref: Bishop-Lilly,K.A. et al. unpublished
REBASE ref # 18070
Complete sequence: 4,743,972 bp
GenBank #: CP009712
REBASE acronym: YpsA
Org_num: 3981
All begin BZ17_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 2021 | peptidase M48 family protein | |||
| 2022 | M | M.YpsMD67I (100% identity) | CYGANNNNNNCTG | M.YpsAI |
| 2023 | S | S.YpsST42ORFCP (100% identity) | CYGANNNNNNCTG | S.YpsAI |
| 2024 | R | YpsST42ORFCP (100% identity) | CYGANNNNNNCTG | YpsAIP |
| 2025 | 40 aa hypothetical protein | |||
| 2698 | type I restriction modification DNA specificity | |||
| 2699 | M | M.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | M.YpsAII |
| 2700 | S | S1.YpsYpse1ORF900P (100% identity) | TGACNNNNNCTC | S.YpsAII |
| 2701 | virulence RhuM family protein | |||
| 2702 | R | YpsST42ORFAP (100% identity) | TGACNNNNNCTC | YpsAIIP |
| 2703 | 240 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 685 | 215 aa hypothetical protein | |||
| 686 | M | M.Yps72344ORF24380P (100% identity) | M.YpsAORF1799P | |
| 687 | phage N-6-adenine-methyltransferase | |||
| 687 | phage N-6-adenine-methyltransferase | |||
| 688 | M | M.Ysi228ORF18130P (100% identity) | CCCGGG | M.YpsAORF1797P |
| 689 | 115 aa hypothetical protein | |||
| 2838 | sporulation related domain protein | |||
| 2839 | M | M.Ysi228DamP (100% identity) | GATC | M.YpsADam |
| 2840 | ribulose-phosphate 3-epimerase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 2706 | helix-turn-helix family protein | |||
| ??? | R | YpsI13MrrP (94% identity) | YpsAMrrP | |
| 2708 | 206 aa hypothetical protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 612 | exonuclease family protein | |||
| 613 | M | M.YpsMD67ORF1128P (100% identity) | GATC | M.YpsAORF1863P |
| 614 | C-5 cytosine-specific DNA methylase domain | |||
| 686 | C-5 cytosine-specific DNA methylase family | |||
| 687 | M | M.Ysi228ORF18135P (100% identity) | GATC | M.YpsAORF1798P |
| 688 | DNA methylase family protein | |||