Xenorhabdus bovienii CS03 |
| [index] - [schematics] - [save as Word doc] |
|
|
|
Putative Xenorhabdus bovienii CS03 RM systems
Ref: Genoscope -,C.E.A. unpublished
REBASE ref # 10128
| Sequence length: | GenBank #: | |
| Chromosome: | 177,250 bp | FO818638 |
| Chromosome: | 4,635,301 bp | FO818637 |
REBASE acronym: XboCS03
Org_num: 14806
All begin XBW1_, XBW1_mp
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1341 | Helix-turn-helix, Fis-type | |||
| 1342 | R | XboSSORF1413P (96% identity) | XboCS03ORF1344P | |
| 1343 | DNA recombination protein ; exported | |||
| 1344 | M | M.XneXORFCP (95% identity) | M.XboCS03ORF1344P | |
| 1345 | S | S.XneXORFCP (62% identity) | S.XboCS03ORF1344P | |
| 1346 | protein of unknown function | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 146 | protein of unknown function | |||
| 147 | M | M.XkhMCBORF2205P (82% identity) | M.XboCS03ORF147P | |
| 148 | Recombination-associated protein rdgC | |||
| 150 | mRNA interferase MazF protein (toxin-antitoxin | |||
| 151 | M | M.Xsp328ORF6005P (60% identity) | M.XboCS03ORF151P | |
| 153 | baseplate protein | |||
| Chromosome | ||||
| 56 | Ribulose-phosphate 3-epimerase | |||
| 57 | M | M.XneXDam2P (100% identity) | GATC | M.XboCS03DamP |
| 58 | membrane protein | |||
| 780 | phage protein | |||
| 781 | M | fragment of putative DNA methylase from phage | M1.XboCS03ORF781P | |
| 782 | transposase | |||
| 783 | transposase | |||
| 784 | M | fragment of putative DNA methylase from phage | M2.XboCS03ORF781P | |
| 785 | 66 aa conserved hypothetical protein | |||
| 1248 | helicase, superfamily I (fragment) | |||
| 1249 | R | KspPL2018ORF4615P (72% identity) | GGCGCC | XboCS03ORF1250P |
| 1250 | M | M.Emo10ORF23155P (84% identity) | GGCGCC | M.XboCS03ORF1250P |
| 1251 | protein of unknown function | |||
| 3082 | 74 aa hypothetical protein | |||
| 3083 | M | M.XhoANU1ORF6280P (87% identity) | GATC | M.XboCS03ORF3083P |
| 3084 | protein of unknown function | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 2422 | conserved protein of unknown function | |||
| 2423 | M | M.XneXORFEP (99% identity) | M.XboCS03ORF2423P | |
| 2424 | R | XneXORFEP (100% identity) | XboCS03ORF2423P | |
| 2425 | Conjugal transfer TraD family protein | |||
| Orphan M | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 869 | protein of unknown function | |||
| 870 | M | M.XneXDamP (91% identity) | GATC | M.XboCS03ORF870P |
| 871 | phage protein | |||