Francisella tularensis subsp. novicida U112 |
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Putative Francisella tularensis subsp. novicida U112 RM systems
Ref: Bishop-Lilly,K.A. et al. unpublished
REBASE ref # 18070
Complete sequence: 1,910,592 bp
GenBank #: CP009633
REBASE acronym: FtnU
Org_num: 4588
All begin AW25_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 851 | 517 aa hypothetical protein | |||
| 852 | R | FphFAJORF1618P (98% identity) | CYYANNNNNNNCTC | FtnUII |
| 853 | S | S.Tpa21527ORF564P (35% identity) | CYYANNNNNNNCTC | S.FtnUII |
| 854 | transposase IS200 like family protein | |||
| 856 | M | M.Ftu7470ORF617P (100% identity) | CYYANNNNNNNCTC | M.FtnUII |
| 855 | sel1 repeat family protein | |||
| 1311 | 219 aa hypothetical protein | |||
| 1312 | R | Ftu10ORF788P (98% identity) | GGHANNNNNNNTAG | FtnUI |
| 1314 | 248 aa hypothetical protein | |||
| 1315 | 81 aa hypothetical protein | |||
| 1316 | S | S.TspXGS01ORF3980P (36% identity) | GGHANNNNNNNTAG | S.FtnUI |
| 1317 | membrane protein | |||
| 1318 | abi-like family protein | |||
| 1319 | M | M.Ftu10ORF788P (99% identity) | GGHANNNNNNNTAG | M.FtnUI |
| 1320 | type I restriction modification DNA specificity | |||
| 1753 | proQ/FINO family protein | |||
| 1755 | R | FcfFx1ORF289P (97% identity) | FtnUORF283P | |
| 1756 | transposase IS200 like family protein | |||
| 1757 | S | S.Ade25694ORF1074P (49% identity) | S.FtnUORF283P | |
| 1758 | fic/DOC family protein | |||
| ??? | M | M.Ftu9876ORF590P (97% identity) | M.FtnUORF283P | |
| 1761 | SPFH domain / Band 7 family protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 289 | phosphoribosylformylglycinamidine synthase | |||
| 290 | R | Ftu2015ORF1430P (98% identity) | GATC | FtnUIV |
| 291 | aldose 1-epimerase family protein | |||
| 1519 | 121 aa hypothetical protein | |||
| 1520 | RM | FphPORF335P (83% identity) | GAAACA | FtnUV |
| 1521 | beta-eliminating lyase family protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 509 | dihydrolipoyl dehydrogenase | |||
| 510 | M | M.FphPORF1891P (60% identity) | AGACC | M.FtnUIII |
| 511 | 283 aa hypothetical protein | |||
| 512 | 248 aa hypothetical protein | |||
| 513 | death-on-curing family protein | |||
| 514 | R | FtuuS4ORF8265P (93% identity) | AGACC | FtnUIII |
| 515 | uracil-DNA glycosylase | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 116 | universal stress family protein | |||
| 117 | R | FnoFTEORFAP (100% identity) | FtnUORF84P | |
| 118 | regulator of chromosome condensation (RCC1) | |||