Geoalkalibacter subterraneus Red1 |
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Putative Geoalkalibacter subterraneus Red1 RM systems
Ref: Badalamenti,J.P. et al. unpublished
REBASE ref # 19312
| Sequence length: | GenBank #: | |
| Chromosome: | 3,475,523 bp | CP010311 |
| plasmid pGSUB1: | 242,122 bp | CP010312 |
REBASE acronym: GsuRed1
Org_num: 14672
All begin GSUB_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 9120 | 70 aa hypothetical protein | |||
| 9125 | R | RdeR2ORF3363P (58% identity) | CGANNNNNNNNNTGAA | GsuRed1VIIP |
| 9130 | 78 aa hypothetical protein | |||
| 9135 | M | M.Pse18267II (90% identity) | CGANNNNNNNNNTGAA | M.GsuRed1VII |
| 9140 | cytochrome C biogenesis protein CycH | |||
| 9145 | S | S.Csp7425ORF1204P (42% identity) | CGANNNNNNNNNTGAA | S.GsuRed1VII |
| 9150 | ATP-dependent DNA helicase RecG | |||
| 9495 | 219 aa hypothetical protein | |||
| 9500 | R | MmaS8ORF3171P (91% identity) | CCGANNNNNNTGC | GsuRed1VIP |
| 9505 | 224 aa hypothetical protein | |||
| 9510 | transposase | |||
| 9515 | S | S.Psp2401I (51% identity) | CCGANNNNNNTGC | S.GsuRed1VI |
| 9520 | M | M.Dac2973ORF1014P (92% identity) | CCGANNNNNNTGC | M.GsuRed1VI |
| 9525 | 92 aa hypothetical protein | |||
| plasmid pGSUB1 | ||||
| 16995 | 63 aa hypothetical protein | |||
| 17000 | M | M.Dco13527III (77% identity) | AAGNNNNNNNTTYG | M.GsuRed1V |
| 17005 | S | S2.Rsp070ORF16245P (47% identity) | AAGNNNNNNNTTYG | S.GsuRed1V |
| 17010 | 144 aa hypothetical protein | |||
| 17015 | R | CspNCRRORF12595P (68% identity) | AAGNNNNNNNTTYG | GsuRed1VP |
| 17020 | 443 aa hypothetical protein | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 4350 | 640 aa hypothetical protein | |||
| 4355 | M | M.DalL21ORFDP (60% identity) | M.GsuRed1ORF4355P | |
| 4360 | transcriptional regulator | |||
| 6625 | 308 aa hypothetical protein | |||
| 6630 | M | M.Npa3BORF18176P (62% identity) | GACNNNGTC | M.GsuRed1IV |
| 6635 | 139 aa hypothetical protein | |||
| 10070 | 120 aa hypothetical protein | |||
| 10075 | M | M.DteS28bFORFJP (98% identity) | GGATC | M.GsuRed1ORF10075P |
| 10080 | DNA-binding protein | |||
| 10080 | DNA-binding protein | |||
| 10085 | M | M.Dsp964I (83% identity) | CTCGAG | M.GsuRed1II |
| 10090 | R | Dsp964IP (89% identity) | CTCGAG | GsuRed1IIP |
| 10095 | head morphogenesis protein | |||
| plasmid pGSUB1 | ||||
| 17050 | branched-chain amino acid aminotransferase I | |||
| 17055 | M | M.Ssp0058ORF27395P (37% identity) | CCNGG | M.GsuRed1ORF17055P |
| 17060 | 96 aa hypothetical protein | |||
| 17375 | 407 aa hypothetical protein | |||
| 17380 | M | M.AspAK7ORF3880P (61% identity) | GTCGAC | M.GsuRed1III |
| 17385 | 250 aa hypothetical protein | |||
| 17385 | 250 aa hypothetical protein | |||
| 17390 | M | M.CbaCRORF2163P (86% identity) | GCCNNNNNGGC | M.GsuRed1I |
| 17395 | 289 aa hypothetical protein | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| Chromosome | ||||
| 1005 | ATP-dependent helicase | |||
| 1010 | M | M.Dfo12BORF1812P (61% identity) | M.GsuRed1ORF1010P | |
| 1015 | R | DspX2ORF1802P (82% identity) | GsuRed1ORF1010P | |
| 1020 | 78 aa hypothetical protein | |||