Campylobacter lari RM16712 |
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Putative Campylobacter lari RM16712 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2014) In press
REBASE ref # 18896
Complete sequence: 1,565,009 bp
GenBank #: CP007778
REBASE acronym: Cla16712
Org_num: 14651
All begin UPTC16712_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 1576 | 153 aa hypothetical protein | |||
| 1577 | M | M.Cje5121ORF3210P (96% identity) | M.Cla16712ORF1577P | |
| 1578 | ATPase, AAA family | |||
| 1579 | S | S1.Che9613ORF6335P (41% identity) | S.Cla16712ORF1577P | |
| 1580 | R | Cje5121ORF3210P (99% identity) | Cla16712ORF1577P | |
| 1581 | 206 aa hypothetical protein (DUF305 domain) | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 34 | translation initiation factor IF-3 | |||
| 35 | M | M.Cla12894I (98% identity) | GAATTC | M.Cla16712ORF35P |
| 36 | transcriptional regulator (WYL domain) | |||
| 408 | IS1595 family transposase (InsA domain) | |||
| 409 | M | M.Cje9ORF585P (100% identity) | M.Cla16712ORF409P | |
| 410 | R | Cje9ORF585P (97% identity) | Cla16712ORF409P | |
| 411 | C | C.CjeJ048ORF3210P (100% identity) | C.Cla16712ORF409P | |
| 412 | 135 aa hypothetical protein, pyridoxine 5-phosphate | |||
| 1158 | NAD-dependent protein deacetylase, SIR2 family | |||
| 1159 | S | S1.HbiMUORF9990P (32% identity) | S.Cla16712ORF1160P | |
| 1160 | RM | Cco10091ORF10200P (91% identity) | Cla16712ORF1160P | |
| 1161 | DNA mismatch binding protein, MutS2 family | |||
| 1444 | type II restriction enzyme | |||
| 1445 | RM | ClaSCHS02ORF4165P (66% identity) | Cla16712ORF1445P | |
| 1446 | PD-(D/E)XK nuclease domain protein | |||