Campylobacter lari RM16701 |
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Putative Campylobacter lari RM16701 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2014) In press
REBASE ref # 18896
Complete sequence: 1,516,455 bp
GenBank #: CP007777
REBASE acronym: Cla16701
Org_num: 14650
All begin UPTC16701_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 32 | translation initiation factor IF-3 | |||
| 33 | M | M.Cla218ORF5705P (97% identity) | GAATTC | M.Cla16701ORF33P |
| 34 | transcriptional regulator (WYL domain) | |||
| 48 | SAM-dependent methyltransferase | |||
| 49 | RM | Csu24374ORF52P (91% identity) | Cla16701ORF49P | |
| 50 | dihydroorotase, homodimeric type | |||
| 1364 | 181 aa hypothetical protein | |||
| 1365 | M | M.Cla11845II (96% identity) | GATC | M.Cla16701ORF1365P |
| 1366 | carbamoylphosphate synthase, large subunit | |||
| 1424 | 201 aa hypothetical protein | |||
| 1425 | RM | Cla21009ORF1402P (97% identity) | Cla16701ORF1425P | |
| 1426 | DNA helicase (AAA domain) | |||
| Type III | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 1342 | ATPase, AAA family | |||
| 1343 | M | type III restriction/modification | M.Cla16701ORF1343P | |
| 1344 | R | Cla12ORFAP (95% identity) | Cla16701ORF1343P | |
| 1345 | cytolethal distending toxin, subunit CdtC | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 231 | 95 aa hypothetical protein | |||
| 232 | R | Cla12893McrBP (64% identity) | Cla16701McrB2P | |
| 233 | R | Cla12894McrC2P (97% identity) | Cla16701McrC2P | |
| 234 | diaminohydroxyphosphoribosylaminopyrimidine | |||
| 844 | 230 aa hypothetical protein | |||
| 845 | R | Cla218McrC2P (99% identity) | Cla16701McrCP | |
| 846 | R | Cje15597AMcrBP (80% identity) | Cla16701McrBP | |
| 847 | 214 aa hypothetical protein | |||