Campylobacter insulaenigrae NCTC 12927 |
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Putative Campylobacter insulaenigrae NCTC 12927 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2014) In press
REBASE ref # 18896
Complete sequence: 1,465,081 bp
GenBank #: CP007770
REBASE acronym: Cin12927
Org_num: 14643
All begin CINS_
| Type II | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 3 | DNA gyrase, subunit B | |||
| 4 | M | M.Cin12927SII (100% identity) | ACNGT | M.Cin12927ORF4P |
| 5 | R | Cin12927SIIP (100% identity) | ACNGT | Cin12927ORF4P |
| 6 | adenosine deaminase | |||
| 29 | translation initiation factor IF-3 | |||
| 30 | R | Cin12927SIP (100% identity) | RAATTY | Cin12927ORF30P |
| 31 | adenine-specific DNA methyltransferase (EcoRI | |||
| 30 | type II restriction endonuclease, EcoRI family | |||
| 31 | M | M.Cin12927SI (100% identity) | RAATTY | M.Cin12927ORF31P |
| 32 | 50S ribosomal protein L35 | |||
| 42 | DNA methyltransferase | |||
| 43 | R | Cin12927SIIIP (100% identity) | CCTTC | Cin12927ORF42P |
| 44 | M | M.Cin12927SIII (100% identity) | CCTTC | M.Cin12927ORF42P |
| 45 | DNA methyltransferase | |||
| 478 | membrane protein | |||
| ??? | RM | Cin12927SORF486P (100% identity) | Cin12927ORF480P | |
| 481 | protein disulfide oxidoreductase | |||
| 849 | 94 aa hypothetical protein | |||
| 850 | M | M.Cin12927SORF865P (100% identity) | M.Cin12927ORFAP | |
| 851 | phage terminase-like protein, large subunit | |||
| 1111 | thiamin biosynthesis protein | |||
| 1112 | RM | Cin12927SORF1130P (100% identity) | Cin12927ORF1112P | |
| 1113 | N-succinyl-diaminopimelate deacylase | |||
| 1234 | RecD-like DNA helicase (AAA domain) | |||
| 1235 | RM | Cin12927SORF1256P (100% identity) | Cin12927ORF1235P | |
| 1236 | pseudogene | |||
| 1504 | molybdenum-pterin binding domain-containing | |||
| 1505 | RM | Cin12927SORF1529P (100% identity) | Cin12927ORF1505P | |
| 1506 | 139 aa hypothetical membrane protein (DUF417 domain) | |||
| Type IV | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 216 | pseudogene | |||
| 217 | R | Cin12927SMcrBP (100% identity) | Cin12927McrBP | |
| 218 | R | Cin12927SMcrCP (100% identity) | Cin12927McrCP | |
| 219 | diaminohydroxyphosphoribosylaminopyrimidine | |||