Campylobacter species RM16704 |
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Putative Campylobacter species RM16704 RM systems
Ref: Miller,W.G. et al. Genome Biol Evol (2014) In press
REBASE ref # 18896
Complete sequence: 1,557,536 bp
GenBank #: CP007769
REBASE acronym: Csp16704
Org_num: 14642
All begin CAQ16704_
| Type I | ||||
|---|---|---|---|---|
| ORF | Gene | Most similar | Specificity | Name |
| 354 | pseudogene | |||
| 355 | R | Cla22395ORF343P (98% identity) | ACANNNNNNNNTCG | Csp16704IP |
| 356 | 198 aa hypothetical protein | |||
| 357 | adenylate/guanylate cyclase | |||
| 358 | S | S.Cco0028ORF60P (63% identity) | ACANNNNNNNNTCG | S.Csp16704I |
| 359 | virulence protein, RhuM family | |||
| 360 | M | M.Csp216ORF1850P (98% identity) | ACANNNNNNNNTCG | M.Csp16704I |
| 361 | molybdopterin molybdenumtransferase | |||
| Type II | ||||
| ORF | Gene | Most similar | Specificity | Name |
| 29 | translation initiation factor IF-3 | |||
| 30 | M | M.Car73571ORF1586P (94% identity) | RAATTY | M.Csp16704II |
| 31 | 50S ribosomal protein L35 | |||
| 99 | imidazoleglycerol-phosphate dehydratase / | |||
| 100 | R | Csp6889ORF6340P (90% identity) | GANTC | Csp16704IIIP |
| 101 | M | M.Csp6889ORF6340P (90% identity) | GANTC | M.Csp16704III |
| 102 | imidazole glycerol phosphate synthase HisFH, | |||
| 1145 | NAD-dependent protein deacetylase, SIR2 family | |||
| 1146 | RM | Cla16712ORF1160P (31% identity) | Csp16704ORF1146P | |
| 1147 | DNA mismatch binding protein, MutS2 family | |||
| 1573 | recombination factor protein RarA | |||
| 1575 | R | Cig2463DORF207P (64% identity) | GCATC | Csp16704IVP |
| ??? | M | M1.Cig2463DORF207P (80% identity) | GCATC | M1.Csp16704IV |
| ??? | M | M2.Cig2463DORF207P (76% identity) | GCATC | M2.Csp16704IV |
| 1577 | protein (DUF305 domain) | |||